Zhou Z - Search Results

1

Informatic challenges and advances in illuminating the druggable proteome.

Taujale R, Gravel N, Zhou Z, Yeung W, Kochut K, Kannan N. Taujale R, et al. Among authors: zhou z. Drug Discov Today. 2024 Mar;29(3):103894. doi: 10.1016/j.drudis.2024.103894. Epub 2024 Jan 22. Drug Discov Today. 2024. PMID: 38266979 Free article. Review.

2

Alignment-free estimation of sequence conservation for identifying functional sites using protein sequence embeddings.

Yeung W, Zhou Z, Li S, Kannan N. Yeung W, et al. Among authors: zhou z. Brief Bioinform. 2023 Jan 19;24(1):bbac599. doi: 10.1093/bib/bbac599. Brief Bioinform. 2023. PMID: 36631405 Free PMC article.

3

Tree visualizations of protein sequence embedding space enable improved functional clustering of diverse protein superfamilies.

Yeung W, Zhou Z, Mathew L, Gravel N, Taujale R, O'Boyle B, Salcedo M, Venkat A, Lanzilotta W, Li S, Kannan N. Yeung W, et al. Among authors: zhou z. Brief Bioinform. 2023 Jan 19;24(1):bbac619. doi: 10.1093/bib/bbac619. Brief Bioinform. 2023. PMID: 36642409 Free PMC article.

4

Phosformer: an explainable transformer model for protein kinase-specific phosphorylation predictions.

Zhou Z, Yeung W, Gravel N, Salcedo M, Soleymani S, Li S, Kannan N. Zhou Z, et al. Bioinformatics. 2023 Feb 3;39(2):btad046. doi: 10.1093/bioinformatics/btad046. Bioinformatics. 2023. PMID: 36692152 Free PMC article.

5

Using explainable machine learning to uncover the kinase-substrate interaction landscape.

Zhou Z, Yeung W, Soleymani S, Gravel N, Salcedo M, Li S, Kannan N. Zhou Z, et al. Bioinformatics. 2024 Feb 1;40(2):btae033. doi: 10.1093/bioinformatics/btae033. Bioinformatics. 2024. PMID: 38244571 Free PMC article.

6

Mapping the glycosyltransferase fold landscape using interpretable deep learning.

Taujale R, Zhou Z, Yeung W, Moremen KW, Li S, Kannan N. Taujale R, et al. Among authors: zhou z. Nat Commun. 2021 Sep 27;12(1):5656. doi: 10.1038/s41467-021-25975-9. Nat Commun. 2021. PMID: 34580305 Free PMC article.

7

Deep evolutionary analysis reveals the design principles of fold A glycosyltransferases.

Taujale R, Venkat A, Huang LC, Zhou Z, Yeung W, Rasheed KM, Li S, Edison AS, Moremen KW, Kannan N. Taujale R, et al. Among authors: zhou z. Elife. 2020 Apr 1;9:e54532. doi: 10.7554/eLife.54532. Elife. 2020. PMID: 32234211 Free PMC article.

8

Functional classification and validation of yeast prenylation motifs using machine learning and genetic reporters.

Berger BM, Yeung W, Goyal A, Zhou Z, Hildebrandt ER, Kannan N, Schmidt WK. Berger BM, et al. Among authors: zhou z. PLoS One. 2022 Jun 24;17(6):e0270128. doi: 10.1371/journal.pone.0270128. eCollection 2022. PLoS One. 2022. PMID: 35749383 Free PMC article.

9

Case Report: Upper gastrointestinal bleeding and multiorgan injury caused by ethylicin poisoning.

Hu W, Li T, Du Y, Yang M, Liu S, He S, Long Q, Fan X, Zhou Z, Li X, Liu J. Hu W, et al. Among authors: zhou z. Front Pharmacol. 2024 Dec 10;15:1472733. doi: 10.3389/fphar.2024.1472733. eCollection 2024. Front Pharmacol. 2024. PMID: 39720590 Free PMC article.

10

[Correlation between inflammatory factors in gingival crevicular fluid and implant stability after oral implant restoration].

Niu WQ, Wang ZH, Zhou ZW. Niu WQ, et al. Among authors: zhou zw. Shanghai Kou Qiang Yi Xue. 2024 Oct;33(5):449-454. Shanghai Kou Qiang Yi Xue. 2024. PMID: 39719833 Chinese.

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