Li M - Search Results

1

stAA: adversarial graph autoencoder for spatial clustering task of spatially resolved transcriptomics.

Fang Z, Liu T, Zheng R, A J, Yin M, Li M. Fang Z, et al. Among authors: li m. Brief Bioinform. 2023 Nov 22;25(1):bbad500. doi: 10.1093/bib/bbad500. Brief Bioinform. 2023. PMID: 38189544 Free PMC article.

2

A comprehensive assessment and comparison of tools for HLA class I peptide-binding prediction.

Wang M, Kurgan L, Li M. Wang M, et al. Among authors: li m. Brief Bioinform. 2023 May 19;24(3):bbad150. doi: 10.1093/bib/bbad150. Brief Bioinform. 2023. PMID: 37068304

3

A posterior probability based Bayesian method for single-cell RNA-seq data imputation.

Chen S, Zheng R, Tian L, Wu FX, Li M. Chen S, et al. Among authors: li m. Methods. 2023 Aug;216:21-38. doi: 10.1016/j.ymeth.2023.06.004. Epub 2023 Jun 12. Methods. 2023. PMID: 37315825

4

scNCL: transferring labels from scRNA-seq to scATAC-seq data with neighborhood contrastive regularization.

Yan X, Zheng R, Chen J, Li M. Yan X, et al. Among authors: li m. Bioinformatics. 2023 Aug 1;39(8):btad505. doi: 10.1093/bioinformatics/btad505. Bioinformatics. 2023. PMID: 37584660 Free PMC article.

5

Inferring single-cell gene regulatory network by non-redundant mutual information.

Zeng Y, He Y, Zheng R, Li M. Zeng Y, et al. Among authors: li m. Brief Bioinform. 2023 Sep 20;24(5):bbad326. doi: 10.1093/bib/bbad326. Brief Bioinform. 2023. PMID: 37715282

6

Drug repositioning with adaptive graph convolutional networks.

Sun X, Jia X, Lu Z, Tang J, Li M. Sun X, et al. Among authors: li m. Bioinformatics. 2024 Jan 2;40(1):btad748. doi: 10.1093/bioinformatics/btad748. Bioinformatics. 2024. PMID: 38070161 Free PMC article.

7

CAKE: a flexible self-supervised framework for enhancing cell visualization, clustering and rare cell identification.

Liu J, Zeng W, Kan S, Li M, Zheng R. Liu J, et al. Among authors: li m. Brief Bioinform. 2023 Nov 22;25(1):bbad475. doi: 10.1093/bib/bbad475. Brief Bioinform. 2023. PMID: 38145950 Free PMC article.

8

scMAE: a masked autoencoder for single-cell RNA-seq clustering.

Fang Z, Zheng R, Li M. Fang Z, et al. Among authors: li m. Bioinformatics. 2024 Jan 2;40(1):btae020. doi: 10.1093/bioinformatics/btae020. Bioinformatics. 2024. PMID: 38230824 Free PMC article.

9

Assembling spatial clustering framework for heterogeneous spatial transcriptomics data with GRAPHDeep.

Liu T, Fang Z, Li X, Zhang L, Cao DS, Li M, Yin M. Liu T, et al. Among authors: li x, li m. Bioinformatics. 2024 Jan 2;40(1):btae023. doi: 10.1093/bioinformatics/btae023. Bioinformatics. 2024. PMID: 38243703 Free PMC article.

10

A comprehensive computational benchmark for evaluating deep learning-based protein function prediction approaches.

Wang W, Shuai Y, Yang Q, Zhang F, Zeng M, Li M. Wang W, et al. Among authors: li m. Brief Bioinform. 2024 Jan 22;25(2):bbae050. doi: 10.1093/bib/bbae050. Brief Bioinform. 2024. PMID: 38388682 Free PMC article.

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