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Author Correction: Mapping disease regulatory circuits at cell-type resolution from single-cell multiomics data.
Chen X, Wang Y, Cappuccio A, Cheng WS, Zamojski FR, Nair VD, Miller CM, Rubenstein AB, Nudelman G, Tadych A, Theesfeld CL, Vornholt A, George MC, Ruffin F, Dagher M, Chawla DG, Soares-Schanoski A, Spurbeck RR, Ndhlovu LC, Sebra R, Kleinstein SH, Letizia AG, Ramos I, Fowler VG Jr, Woods CW, Zaslavsky E, Troyanskaya OG, Sealfon SC. Chen X, et al. Among authors: tadych a. Nat Comput Sci. 2023 Sep;3(9):805. doi: 10.1038/s43588-023-00523-1. Nat Comput Sci. 2023. PMID: 38177788 Free PMC article. No abstract available.
Mapping disease regulatory circuits at cell-type resolution from single-cell multiomics data.
Chen X, Wang Y, Cappuccio A, Cheng WS, Zamojski FR, Nair VD, Miller CM, Rubenstein AB, Nudelman G, Tadych A, Theesfeld CL, Vornholt A, George MC, Ruffin F, Dagher M, Chawla DG, Soares-Schanoski A, Spurbeck RR, Ndhlovu LC, Sebra R, Kleinstein SH, Letizia AG, Ramos I, Fowler VG Jr, Woods CW, Zaslavsky E, Troyanskaya OG, Sealfon SC. Chen X, et al. Among authors: tadych a. Nat Comput Sci. 2023 Jul;3(7):644-657. doi: 10.1038/s43588-023-00476-5. Epub 2023 Jul 25. Nat Comput Sci. 2023. PMID: 37974651 Free PMC article.
Automated single-cell omics end-to-end framework with data-driven batch inference.
Wang Y, Thistlethwaite W, Tadych A, Ruf-Zamojski F, Bernard DJ, Cappuccio A, Zaslavsky E, Chen X, Sealfon SC, Troyanskaya OG. Wang Y, et al. Among authors: tadych a. bioRxiv [Preprint]. 2024 Jun 20:2023.11.01.564815. doi: 10.1101/2023.11.01.564815. bioRxiv. 2024. Update in: Cell Syst. 2024 Oct 16;15(10):982-990.e5. doi: 10.1016/j.cels.2024.09.003 PMID: 37961197 Free PMC article. Updated. Preprint.
Spatial transcriptional mapping of the human nephrogenic program.
Lindström NO, Sealfon R, Chen X, Parvez RK, Ransick A, De Sena Brandine G, Guo J, Hill B, Tran T, Kim AD, Zhou J, Tadych A, Watters A, Wong A, Lovero E, Grubbs BH, Thornton ME, McMahon JA, Smith AD, Ruffins SW, Armit C, Troyanskaya OG, McMahon AP. Lindström NO, et al. Among authors: tadych a. Dev Cell. 2021 Aug 23;56(16):2381-2398.e6. doi: 10.1016/j.devcel.2021.07.017. Dev Cell. 2021. PMID: 34428401 Free PMC article.
Modeling transcriptional regulation of model species with deep learning.
Cofer EM, Raimundo J, Tadych A, Yamazaki Y, Wong AK, Theesfeld CL, Levine MS, Troyanskaya OG. Cofer EM, et al. Among authors: tadych a. Genome Res. 2021 Jun;31(6):1097-1105. doi: 10.1101/gr.266171.120. Epub 2021 Apr 22. Genome Res. 2021. PMID: 33888512 Free PMC article.
Discriminatory Power of Combinatorial Antigen Recognition in Cancer T Cell Therapies.
Dannenfelser R, Allen GM, VanderSluis B, Koegel AK, Levinson S, Stark SR, Yao V, Tadych A, Troyanskaya OG, Lim WA. Dannenfelser R, et al. Among authors: tadych a. Cell Syst. 2020 Sep 23;11(3):215-228.e5. doi: 10.1016/j.cels.2020.08.002. Epub 2020 Sep 10. Cell Syst. 2020. PMID: 32916097 Free PMC article.
18 results