Kim PJ - Search Results

1

Generalized Michaelis-Menten rate law with time-varying molecular concentrations.

Lim R, Martin TLP, Chae J, Kim WJ, Ghim CM, Kim PJ. Lim R, et al. Among authors: kim wj, kim pj. PLoS Comput Biol. 2023 Dec 11;19(12):e1011711. doi: 10.1371/journal.pcbi.1011711. eCollection 2023 Dec. PLoS Comput Biol. 2023. PMID: 38079453 Free PMC article.

2

Large-scale metabolic interaction network of the mouse and human gut microbiota.

Lim R, Cabatbat JJT, Martin TLP, Kim H, Kim S, Sung J, Ghim CM, Kim PJ. Lim R, et al. Among authors: kim h, kim s, kim pj. Sci Data. 2020 Jun 26;7(1):204. doi: 10.1038/s41597-020-0516-5. Sci Data. 2020. PMID: 32591517 Free PMC article.

3

Publisher Correction: Large-scale metabolic interaction network of the mouse and human gut microbiota.

Lim R, Cabatbat JJT, Martin TLP, Kim H, Kim S, Sung J, Ghim CM, Kim PJ. Lim R, et al. Among authors: kim h, kim s, kim pj. Sci Data. 2020 Aug 12;7(1):272. doi: 10.1038/s41597-020-00615-x. Sci Data. 2020. PMID: 32788577 Free PMC article.

4

Cost-effective circadian mechanism: rhythmic degradation of circadian proteins spontaneously emerges without rhythmic post-translational regulation.

Lim R, Chae J, Somers DE, Ghim CM, Kim PJ. Lim R, et al. Among authors: kim pj. iScience. 2021 Jun 14;24(7):102726. doi: 10.1016/j.isci.2021.102726. eCollection 2021 Jul 23. iScience. 2021. PMID: 34355141 Free PMC article.

5

Backward simulation for inferring hidden biomolecular kinetic profiles.

Chae J, Lim R, Ghim CM, Kim PJ. Chae J, et al. Among authors: kim pj. STAR Protoc. 2021 Nov 15;2(4):100958. doi: 10.1016/j.xpro.2021.100958. eCollection 2021 Dec 17. STAR Protoc. 2021. PMID: 34841277 Free PMC article.

6

Enlightening the blind spot of the Michaelis-Menten rate law: The role of relaxation dynamics in molecular complex formation.

Chae J, Lim R, Martin TLP, Ghim CM, Kim PJ. Chae J, et al. Among authors: kim pj. J Theor Biol. 2025 Jan 21;597:111989. doi: 10.1016/j.jtbi.2024.111989. Epub 2024 Nov 16. J Theor Biol. 2025. PMID: 39557361 Free article.

7

Waveforms of molecular oscillations reveal circadian timekeeping mechanisms.

Jo HH, Kim YJ, Kim JK, Foo M, Somers DE, Kim PJ. Jo HH, et al. Among authors: kim yj, kim jk, kim pj. Commun Biol. 2018 Nov 26;1:207. doi: 10.1038/s42003-018-0217-1. eCollection 2018. Commun Biol. 2018. PMID: 30511021 Free PMC article.

8

Kernel Architecture of the Genetic Circuitry of the Arabidopsis Circadian System.

Foo M, Somers DE, Kim PJ. Foo M, et al. Among authors: kim pj. PLoS Comput Biol. 2016 Feb 1;12(2):e1004748. doi: 10.1371/journal.pcbi.1004748. eCollection 2016 Feb. PLoS Comput Biol. 2016. PMID: 26828650 Free PMC article.

9

Multi-study integration of brain cancer transcriptomes reveals organ-level molecular signatures.

Sung J, Kim PJ, Ma S, Funk CC, Magis AT, Wang Y, Hood L, Geman D, Price ND. Sung J, et al. Among authors: kim pj. PLoS Comput Biol. 2013;9(7):e1003148. doi: 10.1371/journal.pcbi.1003148. Epub 2013 Jul 25. PLoS Comput Biol. 2013. PMID: 23935471 Free PMC article.

10

Global metabolic interaction network of the human gut microbiota for context-specific community-scale analysis.

Sung J, Kim S, Cabatbat JJT, Jang S, Jin YS, Jung GY, Chia N, Kim PJ. Sung J, et al. Among authors: kim s, kim pj. Nat Commun. 2017 Jun 6;8:15393. doi: 10.1038/ncomms15393. Nat Commun. 2017. PMID: 28585563 Free PMC article.

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