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Full-spike deep mutational scanning helps predict the evolutionary success of SARS-CoV-2 clades.
Dadonaite B, Brown J, McMahon TE, Farrell AG, Asarnow D, Stewart C, Logue J, Murrell B, Chu HY, Veesler D, Bloom JD. Dadonaite B, et al. Among authors: bloom jd. bioRxiv [Preprint]. 2023 Nov 14:2023.11.13.566961. doi: 10.1101/2023.11.13.566961. bioRxiv. 2023. Update in: Nature. 2024 Jul;631(8021):617-626. doi: 10.1038/s41586-024-07636-1 PMID: 38014024 Free PMC article. Updated. Preprint.
Serological identification of SARS-CoV-2 infections among children visiting a hospital during the initial Seattle outbreak.
Dingens AS, Crawford KHD, Adler A, Steele SL, Lacombe K, Eguia R, Amanat F, Walls AC, Wolf CR, Murphy M, Pettie D, Carter L, Qin X, King NP, Veesler D, Krammer F, Dickerson JA, Chu HY, Englund JA, Bloom JD. Dingens AS, et al. Among authors: bloom jd. medRxiv [Preprint]. 2020 Jun 30:2020.05.26.20114124. doi: 10.1101/2020.05.26.20114124. medRxiv. 2020. Update in: Nat Commun. 2020 Sep 1;11(1):4378. doi: 10.1038/s41467-020-18178-1 PMID: 32511483 Free PMC article. Updated. Preprint.
Deep mutational scanning of SARS-CoV-2 receptor binding domain reveals constraints on folding and ACE2 binding.
Starr TN, Greaney AJ, Hilton SK, Crawford KHD, Navarro MJ, Bowen JE, Tortorici MA, Walls AC, Veesler D, Bloom JD. Starr TN, et al. Among authors: bloom jd. bioRxiv [Preprint]. 2020 Jun 17:2020.06.17.157982. doi: 10.1101/2020.06.17.157982. bioRxiv. 2020. Update in: Cell. 2020 Sep 3;182(5):1295-1310.e20. doi: 10.1016/j.cell.2020.08.012 PMID: 32587970 Free PMC article. Updated. Preprint.
Serological identification of SARS-CoV-2 infections among children visiting a hospital during the initial Seattle outbreak.
Dingens AS, Crawford KHD, Adler A, Steele SL, Lacombe K, Eguia R, Amanat F, Walls AC, Wolf CR, Murphy M, Pettie D, Carter L, Qin X, King NP, Veesler D, Krammer F, Dickerson JA, Chu HY, Englund JA, Bloom JD. Dingens AS, et al. Among authors: bloom jd. Nat Commun. 2020 Sep 1;11(1):4378. doi: 10.1038/s41467-020-18178-1. Nat Commun. 2020. PMID: 32873791 Free PMC article.
Complete mapping of mutations to the SARS-CoV-2 spike receptor-binding domain that escape antibody recognition.
Greaney AJ, Starr TN, Gilchuk P, Zost SJ, Binshtein E, Loes AN, Hilton SK, Huddleston J, Eguia R, Crawford KHD, Dingens AS, Nargi RS, Sutton RE, Suryadevara N, Rothlauf PW, Liu Z, Whelan SPJ, Carnahan RH, Crowe JE Jr, Bloom JD. Greaney AJ, et al. Among authors: bloom jd. bioRxiv [Preprint]. 2020 Sep 28:2020.09.10.292078. doi: 10.1101/2020.09.10.292078. bioRxiv. 2020. Update in: Cell Host Microbe. 2021 Jan 13;29(1):44-57.e9. doi: 10.1016/j.chom.2020.11.007 PMID: 32935107 Free PMC article. Updated. Preprint.
Emergence and spread of a SARS-CoV-2 variant through Europe in the summer of 2020.
Hodcroft EB, Zuber M, Nadeau S, Vaughan TG, Crawford KHD, Althaus CL, Reichmuth ML, Bowen JE, Walls AC, Corti D, Bloom JD, Veesler D, Mateo D, Hernando A, Comas I, González Candelas F; SeqCOVID-SPAIN consortium; Stadler T, Neher RA. Hodcroft EB, et al. Among authors: bloom jd. medRxiv [Preprint]. 2021 Mar 24:2020.10.25.20219063. doi: 10.1101/2020.10.25.20219063. medRxiv. 2021. Update in: Nature. 2021 Jul;595(7869):707-712. doi: 10.1038/s41586-021-03677-y PMID: 33269368 Free PMC article. Updated. Preprint.
427 results