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Exploring Viral Metagenomics in Pediatric Patients with Acute Respiratory Infections: Unveiling Pathogens beyond SARS-CoV-2.
de Campos GM, de La-Roque DGL, Lima ARJ, Zucherato VS, de Carvalho E, de Lima LPO, de Queiroz Cattony Neto P, Dos Santos MM, Ciccozzi M, Giovanetti M, Haddad R, Alcantara LCJ, Elias MC, Sampaio SC, Covas DT, Kashima S, Slavov SN. de Campos GM, et al. Among authors: alcantara lcj. Microorganisms. 2023 Nov 10;11(11):2744. doi: 10.3390/microorganisms11112744. Microorganisms. 2023. PMID: 38004755 Free PMC article.
Globin haplotypes of human T-cell lymphotropic virus type I-infected individuals in Salvador, Bahia, Brazil, suggest a post-Columbian African origin of this virus.
Alcantara LC Jr, Van Dooren S, Gonçalves MS, Kashima S, Costa MC, Santos FL, Bittencourt AL, Dourado I, Filho AA, Covas DT, Vandamme AM, Galvão-Castro B. Alcantara LC Jr, et al. J Acquir Immune Defic Syndr. 2003 Aug 1;33(4):536-42. doi: 10.1097/00126334-200308010-00016. J Acquir Immune Defic Syndr. 2003. PMID: 12869844
Deep Sequencing Analysis of Human T Cell Lymphotropic Virus Type 1 Long Terminal Repeat 5' Region from Patients with Tropical Spastic Paraparesis/Human T Cell Lymphotropic Virus Type 1-Associated Myelopathy and Asymptomatic Carriers.
Rego FF, de Oliveira T, Giovanetti M, Galvão-Castro B, Gonçalves Mde S, Alcantara LC. Rego FF, et al. AIDS Res Hum Retroviruses. 2016 Mar;32(3):279-83. doi: 10.1089/AID.2015.0273. Epub 2015 Nov 10. AIDS Res Hum Retroviruses. 2016. PMID: 26472535
Zika virus complete genome from Salvador, Bahia, Brazil.
Giovanetti M, Faria NR, Nunes MRT, de Vasconcelos JM, Lourenço J, Rodrigues SG, Vianez JL Jr, da Silva SP, Lemos PS, Tavares FN, Martin DP, do Rosário MS, Siqueira IC, Ciccozzi M, Pybus OG, de Oliveira T, Alcantara LC Junior. Giovanetti M, et al. Infect Genet Evol. 2016 Jul;41:142-145. doi: 10.1016/j.meegid.2016.03.030. Epub 2016 Apr 9. Infect Genet Evol. 2016. PMID: 27071531
Genome Detective Coronavirus Typing Tool for rapid identification and characterization of novel coronavirus genomes.
Cleemput S, Dumon W, Fonseca V, Karim WA, Giovanetti M, Alcantara LC, Deforche K, de Oliveira T. Cleemput S, et al. bioRxiv [Preprint]. 2020 Feb 2:2020.01.31.928796. doi: 10.1101/2020.01.31.928796. bioRxiv. 2020. Update in: Bioinformatics. 2020 Jun 1;36(11):3552-3555. doi: 10.1093/bioinformatics/btaa145 PMID: 32511309 Free PMC article. Updated. Preprint.
Whole Genome Sequencing of SARS-CoV-2: Adapting Illumina Protocols for Quick and Accurate Outbreak Investigation during a Pandemic.
Pillay S, Giandhari J, Tegally H, Wilkinson E, Chimukangara B, Lessells R, Moosa Y, Mattison S, Gazy I, Fish M, Singh L, Khanyile KS, San JE, Fonseca V, Giovanetti M, Alcantara LC Jr, de Oliveira T. Pillay S, et al. Genes (Basel). 2020 Aug 17;11(8):949. doi: 10.3390/genes11080949. Genes (Basel). 2020. PMID: 32824573 Free PMC article.
Increased interregional virus exchange and nucleotide diversity outline the expansion of the chikungunya virus ECSA lineage in Brazil.
Xavier J, Alcantara L, Fonseca V, Lima M, Castro E, Fritsch H, Oliveira C, Guimarães N, Adelino T, Evaristo M, Rodrigues ES, Santos EV, de La-Roque D, de Moraes L, Tosta S, Neto A, Rosewell A, Mendonça AF, Leite A, Vasconcelos A, Silva de Mello AL, Vasconcelos B, Montalbano CA, Zanluca C, Freitas C, de Albuquerque CFC, Duarte Dos Santos CN, Santos CS, Dos Santos CA, Maymone Gonçalves CC, Teixeira D, Neto DFL, Cabral D, de Oliveira EC, Noia Maciel EL, Pereira FM, Iani F, de Carvalho FP, Andrade G, Bezerra G, de Castro Lichs GG, Pereira GC, Barroso H, Ferreira Franz HC, Ferreira H, Gomes I, Riediger IN, Rodrigues I, de Siqueira IC, Silva J, Rico JM, Lima J, Abrantes J, do Nascimento JPM, Wasserheit JN, Pastor J, de Magalhães JJF, Luz KG, Lima Neto LG, Frutuoso LCV, da Silva LB, Sena L, de Sousa LAF, Pereira LA, Demarchi L, Câmara MCB, Astete MG, Almiron M, Lima M, Umaki Zardin MCS, Presibella MM, Falcão MB, Gale M Jr, Freire N, Marques N, de Moura NFO, Almeida Da Silva PE, Rabinowitz P, da Cunha RV, Trinta KS, do Carmo Said RF, Kato R, Stabeli R, de Jesus R, Santos RH, Haddad SK, Slavov SN, Andrade T, Rocha T, Carneiro T, Nardy V, da Silva V, Carvalho WG, Van Voorhis WC, Araujo WN, … See abstract for full author list ➔ Xavier J, et al. medRxiv [Preprint]. 2023 Apr 3:2023.03.28.23287733. doi: 10.1101/2023.03.28.23287733. medRxiv. 2023. Update in: Nat Commun. 2023 Jul 21;14(1):4413. doi: 10.1038/s41467-023-40099-y PMID: 37034611 Free PMC article. Updated. Preprint.
189 results