Cavallaro M - Search Results

1

Spatio-temporal surveillance and early detection of SARS-CoV-2 variants of concern: a retrospective analysis.

Cavallaro M, Dyson L, Tildesley MJ, Todkill D, Keeling MJ. Cavallaro M, et al. J R Soc Interface. 2023 Nov;20(208):20230410. doi: 10.1098/rsif.2023.0410. Epub 2023 Nov 15. J R Soc Interface. 2023. PMID: 37963560 Free PMC article.

2

Contrasting factors associated with COVID-19-related ICU admission and death outcomes in hospitalised patients by means of Shapley values.

Cavallaro M, Moiz H, Keeling MJ, McCarthy ND. Cavallaro M, et al. PLoS Comput Biol. 2021 Jun 23;17(6):e1009121. doi: 10.1371/journal.pcbi.1009121. eCollection 2021 Jun. PLoS Comput Biol. 2021. PMID: 34161326 Free PMC article.

3

Cluster detection with random neighbourhood covering: Application to invasive Group A Streptococcal disease.

Cavallaro M, Coelho J, Ready D, Decraene V, Lamagni T, McCarthy ND, Todkill D, Keeling MJ. Cavallaro M, et al. PLoS Comput Biol. 2022 Nov 30;18(11):e1010726. doi: 10.1371/journal.pcbi.1010726. eCollection 2022 Nov. PLoS Comput Biol. 2022. PMID: 36449515 Free PMC article.

4

Informing antimicrobial stewardship with explainable AI.

Cavallaro M, Moran E, Collyer B, McCarthy ND, Green C, Keeling MJ. Cavallaro M, et al. PLOS Digit Health. 2023 Jan 5;2(1):e0000162. doi: 10.1371/journal.pdig.0000162. eCollection 2023 Jan. PLOS Digit Health. 2023. PMID: 36812617 Free PMC article.

5

The role of vaccination and public awareness in forecasts of Mpox incidence in the United Kingdom.

Brand SPC, Cavallaro M, Cumming F, Turner C, Florence I, Blomquist P, Hilton J, Guzman-Rincon LM, House T, Nokes DJ, Keeling MJ. Brand SPC, et al. Among authors: cavallaro m. Nat Commun. 2023 Jul 11;14(1):4100. doi: 10.1038/s41467-023-38816-8. Nat Commun. 2023. PMID: 37433797 Free PMC article.

6

Bayesian inference of polymerase dynamics over the exclusion process.

Cavallaro M, Wang Y, Hebenstreit D, Dutta R. Cavallaro M, et al. R Soc Open Sci. 2023 Aug 2;10(8):221469. doi: 10.1098/rsos.221469. eCollection 2023 Aug. R Soc Open Sci. 2023. PMID: 37538742 Free PMC article.

7

Timing RNA polymerase pausing with TV-PRO-seq.

Zhang J, Cavallaro M, Hebenstreit D. Zhang J, et al. Among authors: cavallaro m. Cell Rep Methods. 2021 Oct 25;1(6):None. doi: 10.1016/j.crmeth.2021.100083. Cell Rep Methods. 2021. PMID: 34723238 Free PMC article.

8

3 ^'-5 ^' crosstalk contributes to transcriptional bursting.

Cavallaro M, Walsh MD, Jones M, Teahan J, Tiberi S, Finkenstädt B, Hebenstreit D. Cavallaro M, et al. Genome Biol. 2021 Feb 4;22(1):56. doi: 10.1186/s13059-020-02227-5. Genome Biol. 2021. PMID: 33541397 Free PMC article.

9

Bayesian inference on stochastic gene transcription from flow cytometry data.

Tiberi S, Walsh M, Cavallaro M, Hebenstreit D, Finkenstädt B. Tiberi S, et al. Among authors: cavallaro m. Bioinformatics. 2018 Sep 1;34(17):i647-i655. doi: 10.1093/bioinformatics/bty568. Bioinformatics. 2018. PMID: 30423089 Free PMC article.

10

N-terminal tagging of RNA Polymerase II shapes transcriptomes more than C-terminal alterations.

Callan-Sidat A, Zewdu E, Cavallaro M, Liu J, Hebenstreit D. Callan-Sidat A, et al. Among authors: cavallaro m. iScience. 2024 May 7;27(6):109914. doi: 10.1016/j.isci.2024.109914. eCollection 2024 Jun 21. iScience. 2024. PMID: 38799575 Free PMC article.

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