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Page 1
DrugBank 6.0: the DrugBank Knowledgebase for 2024.
Knox C, Wilson M, Klinger CM, Franklin M, Oler E, Wilson A, Pon A, Cox J, Chin NEL, Strawbridge SA, Garcia-Patino M, Kruger R, Sivakumaran A, Sanford S, Doshi R, Khetarpal N, Fatokun O, Doucet D, Zubkowski A, Rayat DY, Jackson H, Harford K, Anjum A, Zakir M, Wang F, Tian S, Lee B, Liigand J, Peters H, Wang RQR, Nguyen T, So D, Sharp M, da Silva R, Gabriel C, Scantlebury J, Jasinski M, Ackerman D, Jewison T, Sajed T, Gautam V, Wishart DS. Knox C, et al. Among authors: sivakumaran a. Nucleic Acids Res. 2024 Jan 5;52(D1):D1265-D1275. doi: 10.1093/nar/gkad976. Nucleic Acids Res. 2024. PMID: 37953279 Free PMC article.
HMDB 5.0: the Human Metabolome Database for 2022.
Wishart DS, Guo A, Oler E, Wang F, Anjum A, Peters H, Dizon R, Sayeeda Z, Tian S, Lee BL, Berjanskii M, Mah R, Yamamoto M, Jovel J, Torres-Calzada C, Hiebert-Giesbrecht M, Lui VW, Varshavi D, Varshavi D, Allen D, Arndt D, Khetarpal N, Sivakumaran A, Harford K, Sanford S, Yee K, Cao X, Budinski Z, Liigand J, Zhang L, Zheng J, Mandal R, Karu N, Dambrova M, Schiöth HB, Greiner R, Gautam V. Wishart DS, et al. Among authors: sivakumaran a. Nucleic Acids Res. 2022 Jan 7;50(D1):D622-D631. doi: 10.1093/nar/gkab1062. Nucleic Acids Res. 2022. PMID: 34986597 Free PMC article.
PathBank 2.0-the pathway database for model organism metabolomics.
Wishart DS, Kruger R, Sivakumaran A, Harford K, Sanford S, Doshi R, Kehrtarpal N, Fatokun O, Doucet D, Zubkowski A, Jackson H, Sykes G, Ramirez-Gaona M, Marcu A, Li C, Yee K, Garros C, Rayat DY, Coleongco J, Nandyala T, Gautam V, Oler E. Wishart DS, et al. Among authors: sivakumaran a. Nucleic Acids Res. 2024 Jan 5;52(D1):D654-D662. doi: 10.1093/nar/gkad1041. Nucleic Acids Res. 2024. PMID: 37962386 Free PMC article.
MarkerDB 2.0: a comprehensive molecular biomarker database for 2025.
Jackson H, Oler E, Torres-Calzada C, Kruger R, Hira AS, López-Hernández Y, Pandit D, Wang J, Yang K, Fatokun O, Berjanskii M, MacKay S, Sajed T, Han S, Woudstra R, Sykes G, Poelzer J, Sivakumaran A, Gautam V, Wong G, Wishart DS. Jackson H, et al. Among authors: sivakumaran a. Nucleic Acids Res. 2024 Nov 13:gkae1056. doi: 10.1093/nar/gkae1056. Online ahead of print. Nucleic Acids Res. 2024. PMID: 39535054
Extending the R number by applying hyperparameters of Log Gaussian Cox process models in an epidemiological context to provide insights into COVID-19 positivity in the City of Edinburgh and in students residing at Edinburgh University.
Laxton MR, Nightingale G, Lindgren F, Sivakumaran A, Othieno R. Laxton MR, et al. Among authors: sivakumaran a. PLoS One. 2023 Nov 21;18(11):e0291348. doi: 10.1371/journal.pone.0291348. eCollection 2023. PLoS One. 2023. PMID: 37988358 Free PMC article.
Scottish Index of Multiple Deprivation (SIMD) indicators as predictors of mortality among patients hospitalised with COVID-19 disease in the Lothian Region, Scotland during the first wave: a cohort study.
Scopazzini MS, Cave RNR, Mutch CP, Ross DA, Bularga A, Chase-Topping M, Woolhouse M, Koch O; DataLoch Covid-19 Collaborative; Perry MR, Mackintosh CL. Scopazzini MS, et al. Int J Equity Health. 2023 Oct 5;22(1):205. doi: 10.1186/s12939-023-02017-y. Int J Equity Health. 2023. PMID: 37794428 Free PMC article.
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