Azad RK - Search Results

1

Benchmarking Metagenomic Classifiers on Simulated Ancient and Modern Metagenomic Data.

Pusadkar V, Azad RK. Pusadkar V, et al. Among authors: azad rk. Microorganisms. 2023 Oct 2;11(10):2478. doi: 10.3390/microorganisms11102478. Microorganisms. 2023. PMID: 37894136 Free PMC article.

2

Traffic generated emissions alter the lung microbiota by promoting the expansion of Proteobacteria in C57Bl/6 mice placed on a high-fat diet.

Daniel S, Pusadkar V, McDonald J, Mirpuri J, Azad RK, Goven A, Lund AK. Daniel S, et al. Among authors: azad rk. Ecotoxicol Environ Saf. 2021 Apr 15;213:112035. doi: 10.1016/j.ecoenv.2021.112035. Epub 2021 Feb 11. Ecotoxicol Environ Saf. 2021. PMID: 33581487 Free PMC article.

3

Inhaled diesel exhaust particles result in microbiome-related systemic inflammation and altered cardiovascular disease biomarkers in C57Bl/6 male mice.

Phillippi DT, Daniel S, Pusadkar V, Youngblood VL, Nguyen KN, Azad RK, McFarlin BK, Lund AK. Phillippi DT, et al. Among authors: azad rk. Part Fibre Toxicol. 2022 Feb 9;19(1):10. doi: 10.1186/s12989-022-00452-3. Part Fibre Toxicol. 2022. PMID: 35135577 Free PMC article.

4

Identification of Novel Antimicrobial Resistance Genes Using Machine Learning, Homology Modeling, and Molecular Docking.

Sunuwar J, Azad RK. Sunuwar J, et al. Among authors: azad rk. Microorganisms. 2022 Oct 23;10(11):2102. doi: 10.3390/microorganisms10112102. Microorganisms. 2022. PMID: 36363694 Free PMC article.

5

POSMM: an efficient alignment-free metagenomic profiler that complements alignment-based profiling.

Burks DJ, Pusadkar V, Azad RK. Burks DJ, et al. Among authors: azad rk. Environ Microbiome. 2023 Mar 8;18(1):16. doi: 10.1186/s40793-023-00476-y. Environ Microbiome. 2023. PMID: 36890583 Free PMC article.

6

Using Machine Learning to Predict Genes Underlying Differentiation of Multipartite and Unipartite Traits in Bacteria.

Almalki F, Sunuwar J, Azad RK. Almalki F, et al. Among authors: azad rk. Microorganisms. 2023 Nov 13;11(11):2756. doi: 10.3390/microorganisms11112756. Microorganisms. 2023. PMID: 38004767 Free PMC article.

7

Deciphering Microbial Shifts in the Gut and Lung Microbiomes of COVID-19 Patients.

Pusadkar V, Mazumder A, Azad A, Patil D, Azad RK. Pusadkar V, et al. Among authors: azad rk. Microorganisms. 2024 May 24;12(6):1058. doi: 10.3390/microorganisms12061058. Microorganisms. 2024. PMID: 38930440 Free PMC article.

8

An Analysis of Combined Molecular Weight and Hydrophobicity Similarity between the Amino Acid Sequences of Spike Protein Receptor Binding Domains of Betacoronaviruses and Functionally Similar Sequences from Other Virus Families.

Dixson JD, Vumma L, Azad RK. Dixson JD, et al. Among authors: azad rk. Microorganisms. 2024 Oct 5;12(10):2021. doi: 10.3390/microorganisms12102021. Microorganisms. 2024. PMID: 39458330 Free PMC article.

9

Higher-order Markov models for metagenomic sequence classification.

Burks DJ, Azad RK. Burks DJ, et al. Among authors: azad rk. Bioinformatics. 2020 Aug 15;36(14):4130-4136. doi: 10.1093/bioinformatics/btaa562. Bioinformatics. 2020. PMID: 32516355

10

Mapping Strengths and Weaknesses of Different Clustering Approaches to Deciphering Bacterial Chimerism.

Burks DJ, Azad RK. Burks DJ, et al. Among authors: azad rk. OMICS. 2022 Aug;26(8):422-439. doi: 10.1089/omi.2022.0062. Epub 2022 Aug 4. OMICS. 2022. PMID: 35925817

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