Polasky DA - Search Results

1

Efficient Analysis of Proteome-Wide FPOP Data by FragPipe.

Rojas Ramírez C, Espino JA, Jones LM, Polasky DA, Nesvizhskii AI. Rojas Ramírez C, et al. Among authors: polasky da. Anal Chem. 2023 Nov 7;95(44):16131-16137. doi: 10.1021/acs.analchem.3c02388. Epub 2023 Oct 25. Anal Chem. 2023. PMID: 37878603

2

Liquid chromatography with tandem mass spectrometry quantification of urinary proanthocyanin A2 dimer and its potential use as a biomarker of cranberry intake.

Walsh JM, Ren X, Zampariello C, Polasky DA, McKay DL, Blumberg JB, Chen CY. Walsh JM, et al. Among authors: polasky da. J Sep Sci. 2016 Jan;39(2):342-9. doi: 10.1002/jssc.201500922. Epub 2015 Dec 11. J Sep Sci. 2016. PMID: 26573891

3

Variable-Velocity Traveling-Wave Ion Mobility Separation Enhancing Peak Capacity for Data-Independent Acquisition Proteomics.

Haynes SE, Polasky DA, Dixit SM, Majmudar JD, Neeson K, Ruotolo BT, Martin BR. Haynes SE, et al. Among authors: polasky da. Anal Chem. 2017 Jun 6;89(11):5669-5672. doi: 10.1021/acs.analchem.7b00112. Epub 2017 May 9. Anal Chem. 2017. PMID: 28471653 Free PMC article.

4

IMTBX and Grppr: Software for Top-Down Proteomics Utilizing Ion Mobility-Mass Spectrometry.

Avtonomov DM, Polasky DA, Ruotolo BT, Nesvizhskii AI. Avtonomov DM, et al. Among authors: polasky da. Anal Chem. 2018 Feb 6;90(3):2369-2375. doi: 10.1021/acs.analchem.7b04999. Epub 2018 Jan 16. Anal Chem. 2018. PMID: 29278491 Free PMC article.

5

Fixed-Charge Trimethyl Pyrilium Modification for Enabling Enhanced Top-Down Mass Spectrometry Sequencing of Intact Protein Complexes.

Polasky DA, Lermyte F, Nshanian M, Sobott F, Andrews PC, Loo JA, Ruotolo BT. Polasky DA, et al. Anal Chem. 2018 Feb 20;90(4):2756-2764. doi: 10.1021/acs.analchem.7b04806. Epub 2018 Feb 2. Anal Chem. 2018. PMID: 29360341 Free PMC article.

6

CIUSuite 2: Next-Generation Software for the Analysis of Gas-Phase Protein Unfolding Data.

Polasky DA, Dixit SM, Fantin SM, Ruotolo BT. Polasky DA, et al. Anal Chem. 2019 Feb 19;91(4):3147-3155. doi: 10.1021/acs.analchem.8b05762. Epub 2019 Feb 6. Anal Chem. 2019. PMID: 30668913

7

A Modified Drift Tube Ion Mobility-Mass Spectrometer for Charge-Multiplexed Collision-Induced Unfolding.

Vallejo DD, Polasky DA, Kurulugama RT, Eschweiler JD, Fjeldsted JC, Ruotolo BT. Vallejo DD, et al. Among authors: polasky da. Anal Chem. 2019 Jul 2;91(13):8137-8146. doi: 10.1021/acs.analchem.9b00427. Epub 2019 Jun 13. Anal Chem. 2019. PMID: 31194508

8

An Algorithm for Building Multi-State Classifiers Based on Collision-Induced Unfolding Data.

Polasky DA, Dixit SM, Vallejo DD, Kulju KD, Ruotolo BT. Polasky DA, et al. Anal Chem. 2019 Aug 20;91(16):10407-10412. doi: 10.1021/acs.analchem.9b02650. Epub 2019 Jul 30. Anal Chem. 2019. PMID: 31310505

9

Collision Induced Unfolding Classifies Ligands Bound to the Integral Membrane Translocator Protein.

Fantin SM, Parson KF, Niu S, Liu J, Polasky DA, Dixit SM, Ferguson-Miller SM, Ruotolo BT. Fantin SM, et al. Among authors: polasky da. Anal Chem. 2019 Dec 17;91(24):15469-15476. doi: 10.1021/acs.analchem.9b03208. Epub 2019 Dec 5. Anal Chem. 2019. PMID: 31743004

10

Fast Quantitative Analysis of timsTOF PASEF Data with MSFragger and IonQuant.

Yu F, Haynes SE, Teo GC, Avtonomov DM, Polasky DA, Nesvizhskii AI. Yu F, et al. Among authors: polasky da. Mol Cell Proteomics. 2020 Sep;19(9):1575-1585. doi: 10.1074/mcp.TIR120.002048. Epub 2020 Jul 2. Mol Cell Proteomics. 2020. PMID: 32616513 Free PMC article.

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