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Machine Learning and Prediction in Fetal, Infant, and Toddler Neuroimaging: A Review and Primer.
Scheinost D, Pollatou A, Dufford AJ, Jiang R, Farruggia MC, Rosenblatt M, Peterson H, Rodriguez RX, Dadashkarimi J, Liang Q, Dai W, Foster ML, Camp CC, Tejavibulya L, Adkinson BD, Sun H, Ye J, Cheng Q, Spann MN, Rolison M, Noble S, Westwater ML. Scheinost D, et al. Among authors: ye j. Biol Psychiatry. 2023 May 15;93(10):893-904. doi: 10.1016/j.biopsych.2022.10.014. Epub 2022 Oct 29. Biol Psychiatry. 2023. PMID: 36759257 Free PMC article. Review.
Cross Atlas Remapping via Optimal Transport (CAROT): Creating connectomes for different atlases when raw data is not available.
Dadashkarimi J, Karbasi A, Liang Q, Rosenblatt M, Noble S, Foster M, Rodriguez R, Adkinson B, Ye J, Sun H, Camp C, Farruggia M, Tejavibulya L, Dai W, Jiang R, Pollatou A, Scheinost D. Dadashkarimi J, et al. Among authors: ye j. Med Image Anal. 2023 Aug;88:102864. doi: 10.1016/j.media.2023.102864. Epub 2023 Jun 8. Med Image Anal. 2023. PMID: 37352650 Free PMC article.
Investigating brain dynamics and their association with cognitive control in opioid use disorder using naturalistic and drug cue paradigms.
Ye J, Mehta S, Peterson H, Ibrahim A, Saeed G, Linsky S, Kreinin I, Tsang S, Nwanaji-Enwerem U, Raso A, Arora J, Tokoglu F, Yip SW, Alice Hahn C, Lacadie C, Greene AS, Constable RT, Barry DT, Redeker NS, Yaggi H, Scheinost D. Ye J, et al. medRxiv [Preprint]. 2024 Feb 27:2024.02.25.24303340. doi: 10.1101/2024.02.25.24303340. medRxiv. 2024. PMID: 38464297 Free PMC article. Preprint.
Variation in moment-to-moment brain state engagement changes across development and contributes to individual differences in executive function.
Ye J, Tejavibulya L, Dai W, Cope LM, Hardee JE, Heitzeg MM, Lichenstein S, Yip SW, Banaschewski T, Baker GJ, Bokde ALW, Brühl R, Desrivières S, Flor H, Gowland P, Grigis A, Heinz A, Martinot JL, Paillère Martinot ML, Artiges E, Nees F, Orfanos DP, Poustka L, Hohmann S, Holz N, Baeuchl C, Smolka MN, Vaidya N, Walter H, Whelan R, Schumann G, Garavan H, Chaarani B, Gee DG, Baskin-Sommers A, Casey BJ; IMAGEN consortium; Scheinost D. Ye J, et al. bioRxiv [Preprint]. 2024 Sep 11:2024.09.06.611627. doi: 10.1101/2024.09.06.611627. bioRxiv. 2024. PMID: 39314397 Free PMC article. Preprint.
Alterations in Volume and Intrinsic Resting-State Functional Connectivity Detected at Brain MRI in Individuals with Opioid Use Disorder.
Mehta S, Peterson H, Ye J, Ibrahim A, Saeed G, Linsky S, Kreinin I, Tsang S, Nwanaji-Enwerem U, Raso A, Arora J, Tokoglu F, Yip SW, Hahn CA, Lacadie C, Greene AS, Jeon S, Constable RT, Barry DT, Redeker NS, Yaggi H, Scheinost D. Mehta S, et al. Among authors: ye j. Radiology. 2024 Dec;313(3):e240514. doi: 10.1148/radiol.240514. Radiology. 2024. PMID: 39656127
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