Chen C - Search Results

1

KSFinder-a knowledge graph model for link prediction of novel phosphorylated substrates of kinases.

Anandakrishnan M, Ross KE, Chen C, Shanker V, Cowart J, Wu CH. Anandakrishnan M, et al. Among authors: chen c. PeerJ. 2023 Oct 6;11:e16164. doi: 10.7717/peerj.16164. eCollection 2023. PeerJ. 2023. PMID: 37818330 Free PMC article.

2

Protein Bioinformatics Infrastructure for the Integration and Analysis of Multiple High-Throughput "omics" Data.

Chen C, McGarvey PB, Huang H, Wu CH. Chen C, et al. Adv Bioinformatics. 2010;2010:423589. doi: 10.1155/2010/423589. Epub 2010 Mar 29. Adv Bioinformatics. 2010. PMID: 20369061 Free PMC article.

3

Protein bioinformatics databases and resources.

Chen C, Huang H, Wu CH. Chen C, et al. Methods Mol Biol. 2011;694:3-24. doi: 10.1007/978-1-60761-977-2_1. Methods Mol Biol. 2011. PMID: 21082424 Review.

4

Representative proteomes: a stable, scalable and unbiased proteome set for sequence analysis and functional annotation.

Chen C, Natale DA, Finn RD, Huang H, Zhang J, Wu CH, Mazumder R. Chen C, et al. PLoS One. 2011 Apr 27;6(4):e18910. doi: 10.1371/journal.pone.0018910. PLoS One. 2011. PMID: 21556138 Free PMC article.

5

Community annotation and bioinformatics workforce development in concert--Little Skate Genome Annotation Workshops and Jamborees.

Wang Q, Arighi CN, King BL, Polson SW, Vincent J, Chen C, Huang H, Kingham BF, Page ST, Rendino MF, Thomas WK, Udwary DW, Wu CH; North East Bioinformatics Collaborative Curation Team. Wang Q, et al. Among authors: chen c. Database (Oxford). 2012 Mar 20;2012:bar064. doi: 10.1093/database/bar064. Print 2012. Database (Oxford). 2012. PMID: 22434832 Free PMC article.

6

Elevated FGF21 secretion, PGC-1α and ketogenic enzyme expression are hallmarks of iron-sulfur cluster depletion in human skeletal muscle.

Crooks DR, Natarajan TG, Jeong SY, Chen C, Park SY, Huang H, Ghosh MC, Tong WH, Haller RG, Wu C, Rouault TA. Crooks DR, et al. Among authors: chen c. Hum Mol Genet. 2014 Jan 1;23(1):24-39. doi: 10.1093/hmg/ddt393. Epub 2013 Aug 13. Hum Mol Genet. 2014. PMID: 23943793 Free PMC article.

7

A fast Peptide Match service for UniProt Knowledgebase.

Chen C, Li Z, Huang H, Suzek BE, Wu CH; UniProt Consortium. Chen C, et al. Bioinformatics. 2013 Nov 1;29(21):2808-9. doi: 10.1093/bioinformatics/btt484. Epub 2013 Aug 19. Bioinformatics. 2013. PMID: 23958731 Free PMC article.

8

Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data.

Poux S, Magrane M, Arighi CN, Bridge A, O'Donovan C, Laiho K; UniProt Consortium. Poux S, et al. Database (Oxford). 2014 Mar 12;2014:bau016. doi: 10.1093/database/bau016. Print 2014. Database (Oxford). 2014. PMID: 24622611 Free PMC article.

9

Software for pre-processing Illumina next-generation sequencing short read sequences.

Chen C, Khaleel SS, Huang H, Wu CH. Chen C, et al. Source Code Biol Med. 2014 May 3;9:8. doi: 10.1186/1751-0473-9-8. eCollection 2014. Source Code Biol Med. 2014. PMID: 24955109 Free PMC article.

10

SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes.

Wyffels J, King BL, Vincent J, Chen C, Wu CH, Polson SW. Wyffels J, et al. Among authors: chen c. F1000Res. 2014 Aug 12;3:191. doi: 10.12688/f1000research.4996.1. eCollection 2014. F1000Res. 2014. PMID: 25309735 Free PMC article.

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