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Proximity-dependent mapping of the HCMV US28 interactome identifies RhoGEF signaling as a requirement for efficient viral reactivation.
Medica S, Crawford LB, Denton M, Min CK, Jones TA, Alexander T, Parkins CJ, Diggins NL, Streblow GJ, Mayo AT, Kreklywich CN, Smith P, Jeng S, McWeeney S, Hancock MH, Yurochko A, Cohen MS, Caposio P, Streblow DN. Medica S, et al. Among authors: mcweeney s. PLoS Pathog. 2023 Oct 2;19(10):e1011682. doi: 10.1371/journal.ppat.1011682. eCollection 2023 Oct. PLoS Pathog. 2023. PMID: 37782657 Free PMC article.
How I read an article that uses machine learning methods.
Nazha A, Elemento O, McWeeney S, Miles M, Haferlach T. Nazha A, et al. Among authors: mcweeney s. Blood Adv. 2023 Aug 22;7(16):4550-4554. doi: 10.1182/bloodadvances.2023010140. Blood Adv. 2023. PMID: 37276509 Free PMC article. No abstract available.
Multi-omics analysis in mouse primary cortical neurons reveals complex positive and negative biological interactions between constituent compounds in Centella asiatica.
Chamberlin S, Zweig JA, Neff CJ, Marney L, Choi J, Yang L, Maier CS, Soumyanath A, McWeeney S, Gray NE. Chamberlin S, et al. Among authors: mcweeney s. bioRxiv [Preprint]. 2024 Nov 4:2024.11.04.621595. doi: 10.1101/2024.11.04.621595. bioRxiv. 2024. PMID: 39574684 Free PMC article. Preprint.
AI-readiness for Biomedical Data: Bridge2AI Recommendations.
Clark T, Caufield H, Parker JA, Al Manir S, Amorim E, Eddy J, Gim N, Gow B, Goar W, Haendel M, Hansen JN, Harris N, Hermjakob H, Joachimiak M, Jordan G, Lee IH, McWeeney SK, Nebeker C, Nikolov M, Shaffer J, Sheffield N, Sheynkman G, Stevenson J, Chen JY, Mungall C, Wagner A, Kong SW, Ghosh SS, Patel B, Williams A, Munoz-Torres MC. Clark T, et al. Among authors: mcweeney sk. bioRxiv [Preprint]. 2024 Nov 24:2024.10.23.619844. doi: 10.1101/2024.10.23.619844. bioRxiv. 2024. PMID: 39484409 Free PMC article. Preprint.
Multiomic profiling identifies predictors of survival in African American patients with acute myeloid leukemia.
Stiff A, Fornerod M, Kain BN, Nicolet D, Kelly BJ, Miller KE, Mrózek K, Boateng I, Bollas A, Garfinkle EAR, Momoh O, Fasola FA, Olawumi HO, Mencia-Trinchant N, Kloppers JF, van Marle AC, Hu E, Wijeratne S, Wheeler G, Walker CJ, Buss J, Heyrosa A, Desai H, Laganson A, Hamp E, Abu-Shihab Y, Abaza H, Kronen P, Sen S, Johnstone ME, Quinn K, Wronowski B, Hertlein E, Miles LA, Mims AS, Oakes CC, Blachly JS, Larkin KT, Mundy-Bosse B, Carroll AJ, Powell BL, Kolitz JE, Stone RM, Duarte C, Abbott D, Amaya ML, Jordan CT, Uy GL, Stock W, Archer KJ, Paskett ED, Guzman ML, Levine RL, Menghrajani K, Chakravarty D, Berger MF, Bottomly D, McWeeney SK, Tyner JW, Byrd JC, Salomonis N, Grimes HL, Mardis ER, Eisfeld AK. Stiff A, et al. Among authors: mcweeney sk. Nat Genet. 2024 Nov;56(11):2434-2446. doi: 10.1038/s41588-024-01929-x. Epub 2024 Oct 4. Nat Genet. 2024. PMID: 39367245 Free PMC article.
Data Valuation with Gradient Similarity.
Evans NJ, Mills GB, Wu G, Song X, McWeeney S. Evans NJ, et al. Among authors: mcweeney s. ArXiv [Preprint]. 2024 May 13:arXiv:2405.08217v1. ArXiv. 2024. PMID: 38800649 Free PMC article. Preprint.
Just how transformative will AI/ML be for immuno-oncology?
Bottomly D, McWeeney S. Bottomly D, et al. Among authors: mcweeney s. J Immunother Cancer. 2024 Mar 25;12(3):e007841. doi: 10.1136/jitc-2023-007841. J Immunother Cancer. 2024. PMID: 38531545 Free PMC article. Review.
220 results