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Predicting regional somatic mutation rates using DNA motifs.
Liu C, Wang Z, Wang J, Liu C, Wang M, Ngo V, Wang W. Liu C, et al. Among authors: wang w, wang z, wang j, wang m. PLoS Comput Biol. 2023 Oct 2;19(10):e1011536. doi: 10.1371/journal.pcbi.1011536. eCollection 2023 Oct. PLoS Comput Biol. 2023. PMID: 37782656 Free PMC article.
Finding de novo methylated DNA motifs.
Ngo V, Wang M, Wang W. Ngo V, et al. Among authors: wang w, wang m. Bioinformatics. 2019 Sep 15;35(18):3287-3293. doi: 10.1093/bioinformatics/btz079. Bioinformatics. 2019. PMID: 30726880 Free PMC article.
Identification of DNA motifs that regulate DNA methylation.
Wang M, Zhang K, Ngo V, Liu C, Fan S, Whitaker JW, Chen Y, Ai R, Chen Z, Wang J, Zheng L, Wang W. Wang M, et al. Among authors: wang w, wang j. Nucleic Acids Res. 2019 Jul 26;47(13):6753-6768. doi: 10.1093/nar/gkz483. Nucleic Acids Res. 2019. PMID: 31334813 Free PMC article.
Deciphering the genetic code of DNA methylation.
Wang M, Ngo V, Wang W. Wang M, et al. Among authors: wang w. Brief Bioinform. 2021 Sep 2;22(5):bbaa424. doi: 10.1093/bib/bbaa424. Brief Bioinform. 2021. PMID: 33432324 Free PMC article. Review.
[No title available]
[No authors listed] [No authors listed] PMID: 33954620
Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes.
ENCODE Project Consortium; Moore JE, Purcaro MJ, Pratt HE, Epstein CB, Shoresh N, Adrian J, Kawli T, Davis CA, Dobin A, Kaul R, Halow J, Van Nostrand EL, Freese P, Gorkin DU, Shen Y, He Y, Mackiewicz M, Pauli-Behn F, Williams BA, Mortazavi A, Keller CA, Zhang XO, Elhajjajy SI, Huey J, Dickel DE, Snetkova V, Wei X, Wang X, Rivera-Mulia JC, Rozowsky J, Zhang J, Chhetri SB, Zhang J, Victorsen A, White KP, Visel A, Yeo GW, Burge CB, Lécuyer E, Gilbert DM, Dekker J, Rinn J, Mendenhall EM, Ecker JR, Kellis M, Klein RJ, Noble WS, Kundaje A, Guigó R, Farnham PJ, Cherry JM, Myers RM, Ren B, Graveley BR, Gerstein MB, Pennacchio LA, Snyder MP, Bernstein BE, Wold B, Hardison RC, Gingeras TR, Stamatoyannopoulos JA, Weng Z. ENCODE Project Consortium, et al. Among authors: wang x. Nature. 2022 May;605(7909):E3. doi: 10.1038/s41586-021-04226-3. Nature. 2022. PMID: 35474001 Free PMC article. No abstract available.
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