Radivojac P - Search Results

1

Learning from the unknown: exploring the range of bacterial functionality.

Mahlich Y, Zhu C, Chung H, Velaga PK, De Paolis Kaluza MC, Radivojac P, Friedberg I, Bromberg Y. Mahlich Y, et al. Among authors: radivojac p. Nucleic Acids Res. 2023 Oct 27;51(19):10162-10175. doi: 10.1093/nar/gkad757. Nucleic Acids Res. 2023. PMID: 37739408 Free PMC article.

2

Bioinformatics curriculum guidelines: toward a definition of core competencies.

Welch L, Lewitter F, Schwartz R, Brooksbank C, Radivojac P, Gaeta B, Schneider MV. Welch L, et al. Among authors: radivojac p. PLoS Comput Biol. 2014 Mar 6;10(3):e1003496. doi: 10.1371/journal.pcbi.1003496. eCollection 2014 Mar. PLoS Comput Biol. 2014. PMID: 24603430 Free PMC article. No abstract available.

3

ISCB computational biology Wikipedia competition.

Bateman A, Kelso J, Mietchen D, Macintyre G, Di Domenico T, Abeel T, Logan DW, Radivojac P, Rost B. Bateman A, et al. Among authors: radivojac p. PLoS Comput Biol. 2013;9(9):e1003242. doi: 10.1371/journal.pcbi.1003242. Epub 2013 Sep 19. PLoS Comput Biol. 2013. PMID: 24068913 Free PMC article. No abstract available.

4

An integrated regulatory network reveals pervasive cross-regulation among transcription and splicing factors.

Kosti I, Radivojac P, Mandel-Gutfreund Y. Kosti I, et al. Among authors: radivojac p. PLoS Comput Biol. 2012;8(7):e1002603. doi: 10.1371/journal.pcbi.1002603. Epub 2012 Jul 26. PLoS Comput Biol. 2012. PMID: 22844237 Free PMC article.

5

In silico functional profiling of human disease-associated and polymorphic amino acid substitutions.

Mort M, Evani US, Krishnan VG, Kamati KK, Baenziger PH, Bagchi A, Peters BJ, Sathyesh R, Li B, Sun Y, Xue B, Shah NH, Kann MG, Cooper DN, Radivojac P, Mooney SD. Mort M, et al. Among authors: radivojac p. Hum Mutat. 2010 Mar;31(3):335-46. doi: 10.1002/humu.21192. Hum Mutat. 2010. PMID: 20052762 Free PMC article.

6

Classification in biological networks with hypergraphlet kernels.

Lugo-Martinez J, Zeiberg D, Gaudelet T, Malod-Dognin N, Przulj N, Radivojac P. Lugo-Martinez J, et al. Among authors: radivojac p. Bioinformatics. 2021 May 17;37(7):1000-1007. doi: 10.1093/bioinformatics/btaa768. Bioinformatics. 2021. PMID: 32886115 Free PMC article.

7

Alu insertion polymorphisms shared by Papio baboons and Theropithecus gelada reveal an intertwined common ancestry.

Walker JA, Jordan VE, Storer JM, Steely CJ, Gonzalez-Quiroga P, Beckstrom TO, Rewerts LC, St Romain CP, Rockwell CE, Rogers J, Jolly CJ, Konkel MK; Baboon Genome Analysis Consortium; Batzer MA. Walker JA, et al. Mob DNA. 2019 Nov 26;10:46. doi: 10.1186/s13100-019-0187-y. eCollection 2019. Mob DNA. 2019. PMID: 31788036 Free PMC article.

8

Graphlet kernels for prediction of functional residues in protein structures.

Vacic V, Iakoucheva LM, Lonardi S, Radivojac P. Vacic V, et al. Among authors: radivojac p. J Comput Biol. 2010 Jan;17(1):55-72. doi: 10.1089/cmb.2009.0029. J Comput Biol. 2010. PMID: 20078397 Free PMC article.

9

Computational approaches to protein inference in shotgun proteomics.

Li YF, Radivojac P. Li YF, et al. Among authors: radivojac p. BMC Bioinformatics. 2012;13 Suppl 16(Suppl 16):S4. doi: 10.1186/1471-2105-13-S16-S4. Epub 2012 Nov 5. BMC Bioinformatics. 2012. PMID: 23176300 Free PMC article. Review.

10

A bayesian approach to protein inference problem in shotgun proteomics.

Li YF, Arnold RJ, Li Y, Radivojac P, Sheng Q, Tang H. Li YF, et al. Among authors: radivojac p. J Comput Biol. 2009 Aug;16(8):1183-93. doi: 10.1089/cmb.2009.0018. J Comput Biol. 2009. PMID: 19645593 Free PMC article.

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