Li M - Search Results

1

Inferring single-cell gene regulatory network by non-redundant mutual information.

Zeng Y, He Y, Zheng R, Li M. Zeng Y, et al. Among authors: li m. Brief Bioinform. 2023 Sep 20;24(5):bbad326. doi: 10.1093/bib/bbad326. Brief Bioinform. 2023. PMID: 37715282

2

A comprehensive assessment and comparison of tools for HLA class I peptide-binding prediction.

Wang M, Kurgan L, Li M. Wang M, et al. Among authors: li m. Brief Bioinform. 2023 May 19;24(3):bbad150. doi: 10.1093/bib/bbad150. Brief Bioinform. 2023. PMID: 37068304

3

A posterior probability based Bayesian method for single-cell RNA-seq data imputation.

Chen S, Zheng R, Tian L, Wu FX, Li M. Chen S, et al. Among authors: li m. Methods. 2023 Aug;216:21-38. doi: 10.1016/j.ymeth.2023.06.004. Epub 2023 Jun 12. Methods. 2023. PMID: 37315825

4

scNCL: transferring labels from scRNA-seq to scATAC-seq data with neighborhood contrastive regularization.

Yan X, Zheng R, Chen J, Li M. Yan X, et al. Among authors: li m. Bioinformatics. 2023 Aug 1;39(8):btad505. doi: 10.1093/bioinformatics/btad505. Bioinformatics. 2023. PMID: 37584660 Free PMC article.

5

CAKE: a flexible self-supervised framework for enhancing cell visualization, clustering and rare cell identification.

Liu J, Zeng W, Kan S, Li M, Zheng R. Liu J, et al. Among authors: li m. Brief Bioinform. 2023 Nov 22;25(1):bbad475. doi: 10.1093/bib/bbad475. Brief Bioinform. 2023. PMID: 38145950 Free PMC article.

6

stAA: adversarial graph autoencoder for spatial clustering task of spatially resolved transcriptomics.

Fang Z, Liu T, Zheng R, A J, Yin M, Li M. Fang Z, et al. Among authors: li m. Brief Bioinform. 2023 Nov 22;25(1):bbad500. doi: 10.1093/bib/bbad500. Brief Bioinform. 2023. PMID: 38189544 Free PMC article.

7

scMAE: a masked autoencoder for single-cell RNA-seq clustering.

Fang Z, Zheng R, Li M. Fang Z, et al. Among authors: li m. Bioinformatics. 2024 Jan 2;40(1):btae020. doi: 10.1093/bioinformatics/btae020. Bioinformatics. 2024. PMID: 38230824 Free PMC article.

8

A comprehensive computational benchmark for evaluating deep learning-based protein function prediction approaches.

Wang W, Shuai Y, Yang Q, Zhang F, Zeng M, Li M. Wang W, et al. Among authors: li m. Brief Bioinform. 2024 Jan 22;25(2):bbae050. doi: 10.1093/bib/bbae050. Brief Bioinform. 2024. PMID: 38388682 Free PMC article.

9

scMLC: an accurate and robust multiplex community detection method for single-cell multi-omics data.

Chen Y, Zheng R, Liu J, Li M. Chen Y, et al. Among authors: li m. Brief Bioinform. 2024 Jan 22;25(2):bbae101. doi: 10.1093/bib/bbae101. Brief Bioinform. 2024. PMID: 38493339 Free PMC article.

10

TripHLApan: predicting HLA molecules binding peptides based on triple coding matrix and transfer learning.

Wang M, Lei C, Wang J, Li Y, Li M. Wang M, et al. Among authors: li y, li m. Brief Bioinform. 2024 Mar 27;25(3):bbae154. doi: 10.1093/bib/bbae154. Brief Bioinform. 2024. PMID: 38600667 Free PMC article.

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