Jonniya NA - Search Results

1

Role of the αC-β4 loop in protein kinase structure and dynamics.

Wu J, Jonniya NA, Hirakis SP, Olivieri C, Veglia G, Kornev AP, Taylor SS. Wu J, et al. Among authors: jonniya na. Elife. 2024 Dec 4;12:RP91980. doi: 10.7554/eLife.91980. Elife. 2024. PMID: 39630082 Free PMC article.

2

Computer-aided Affinity Enhancement of a Cross-reactive Antibody against Dengue Virus Envelope Domain III.

Jonniya NA, Poddar S, Mahapatra S, Kar P. Jonniya NA, et al. Cell Biochem Biophys. 2023 Dec;81(4):737-755. doi: 10.1007/s12013-023-01175-8. Epub 2023 Sep 21. Cell Biochem Biophys. 2023. PMID: 37735329

3

Protein Kinase Structure and Dynamics: Role of the αC-β4 Loop.

Wu J, Jonniya NA, Hirakis SP, Olivieri C, Veglia G, Kornev AP, Taylor SS. Wu J, et al. Among authors: jonniya na. bioRxiv [Preprint]. 2023 Oct 16:2023.08.31.555822. doi: 10.1101/2023.08.31.555822. bioRxiv. 2023. Update in: Elife. 2024 Dec 04;12:RP91980. doi: 10.7554/eLife.91980 PMID: 37693538 Free PMC article. Updated. Preprint.

4

Molecular dynamics simulations reveal phosphorylation-induced conformational dynamics of the fibroblast growth factor receptor 1 kinase.

Mahapatra S, Jonniya NA, Koirala S, Kar P. Mahapatra S, et al. Among authors: jonniya na. J Biomol Struct Dyn. 2024 Apr;42(6):2929-2941. doi: 10.1080/07391102.2023.2209189. Epub 2023 May 9. J Biomol Struct Dyn. 2024. PMID: 37160693

5

The FGF/FGFR signalling mediated anti-cancer drug resistance and therapeutic intervention.

Mahapatra S, Jonniya NA, Koirala S, Ursal KD, Kar P. Mahapatra S, et al. Among authors: jonniya na. J Biomol Struct Dyn. 2023;41(22):13509-13533. doi: 10.1080/07391102.2023.2191721. Epub 2023 Mar 30. J Biomol Struct Dyn. 2023. PMID: 36995019 Review.

6

Functional Loop Dynamics and Characterization of the Inactive State of the NS2B-NS3 Dengue Protease due to Allosteric Inhibitor Binding.

Jonniya NA, Kar P. Jonniya NA, et al. J Chem Inf Model. 2022 Aug 22;62(16):3800-3813. doi: 10.1021/acs.jcim.2c00461. Epub 2022 Aug 11. J Chem Inf Model. 2022. PMID: 35950997

7

Effect of Sulfation on the Conformational Dynamics of Dermatan Sulfate Glycosaminoglycan: A Gaussian Accelerated Molecular Dynamics Study.

Roy R, Jonniya NA, Kar P. Roy R, et al. Among authors: jonniya na. J Phys Chem B. 2022 Jun 2;126(21):3852-3866. doi: 10.1021/acs.jpcb.2c01807. Epub 2022 May 20. J Phys Chem B. 2022. PMID: 35594147

8

Comparative Structural Dynamics of Isoforms of Helicobacter pylori Adhesin BabA Bound to Lewis b Hexasaccharide via Multiple Replica Molecular Dynamics Simulations.

Roy R, Jonniya NA, Sk MF, Kar P. Roy R, et al. Among authors: jonniya na. Front Mol Biosci. 2022 May 2;9:852895. doi: 10.3389/fmolb.2022.852895. eCollection 2022. Front Mol Biosci. 2022. PMID: 35586194 Free PMC article.

9

Phosphorylation-Induced Conformational Dynamics and Inhibition of Janus Kinase 1 by Suppressors of Cytokine Signaling 1.

Sk MF, Jonniya NA, Roy R, Kar P. Sk MF, et al. Among authors: jonniya na. J Phys Chem B. 2022 May 5;126(17):3224-3239. doi: 10.1021/acs.jpcb.1c10733. Epub 2022 Apr 20. J Phys Chem B. 2022. PMID: 35443129

10

Unraveling the Molecular Mechanism of Recognition of Selected Next-Generation Antirheumatoid Arthritis Inhibitors by Janus Kinase 1.

Sk MF, Jonniya NA, Roy R, Kar P. Sk MF, et al. Among authors: jonniya na. ACS Omega. 2022 Feb 9;7(7):6195-6209. doi: 10.1021/acsomega.1c06715. eCollection 2022 Feb 22. ACS Omega. 2022. PMID: 35224383 Free PMC article.

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