Harrington HA - Search Results

1

Zigzag persistence for coral reef resilience using a stochastic spatial model.

McDonald RA, Neuhausler R, Robinson M, Larsen LG, Harrington HA, Bruna M. McDonald RA, et al. Among authors: harrington ha. J R Soc Interface. 2023 Aug;20(205):20230280. doi: 10.1098/rsif.2023.0280. Epub 2023 Aug 23. J R Soc Interface. 2023. PMID: 37608713 Free PMC article.

2

Numerical algebraic geometry for model selection and its application to the life sciences.

Gross E, Davis B, Ho KL, Bates DJ, Harrington HA. Gross E, et al. Among authors: harrington ha. J R Soc Interface. 2016 Oct;13(123):20160256. doi: 10.1098/rsif.2016.0256. J R Soc Interface. 2016. PMID: 27733697 Free PMC article.

3

Tensor clustering with algebraic constraints gives interpretable groups of crosstalk mechanisms in breast cancer.

Seigal A, Beguerisse-Díaz M, Schoeberl B, Niepel M, Harrington HA. Seigal A, et al. Among authors: harrington ha. J R Soc Interface. 2019 Feb 28;16(151):20180661. doi: 10.1098/rsif.2018.0661. J R Soc Interface. 2019. PMID: 30958184 Free PMC article.

4

Homology of homologous knotted proteins.

Benjamin K, Mukta L, Moryoussef G, Uren C, Harrington HA, Tillmann U, Barbensi A. Benjamin K, et al. Among authors: harrington ha. J R Soc Interface. 2023 Apr;20(201):20220727. doi: 10.1098/rsif.2022.0727. Epub 2023 Apr 26. J R Soc Interface. 2023. PMID: 37122282 Free PMC article.

5

Graph-facilitated resonant mode counting in stochastic interaction networks.

Adamer MF, Woolley TE, Harrington HA. Adamer MF, et al. Among authors: harrington ha. J R Soc Interface. 2017 Dec;14(137):20170447. doi: 10.1098/rsif.2017.0447. J R Soc Interface. 2017. PMID: 29212754 Free PMC article.

6

Relational Persistent Homology for Multispecies Data with Application to the Tumor Microenvironment.

Stolz BJ, Dhesi J, Bull JA, Harrington HA, Byrne HM, Yoon IHR. Stolz BJ, et al. Among authors: harrington ha. Bull Math Biol. 2024 Sep 17;86(11):128. doi: 10.1007/s11538-024-01353-6. Bull Math Biol. 2024. PMID: 39287883 Free PMC article.

7

Multiparameter persistent homology landscapes identify immune cell spatial patterns in tumors.

Vipond O, Bull JA, Macklin PS, Tillmann U, Pugh CW, Byrne HM, Harrington HA. Vipond O, et al. Among authors: harrington ha. Proc Natl Acad Sci U S A. 2021 Oct 12;118(41):e2102166118. doi: 10.1073/pnas.2102166118. Proc Natl Acad Sci U S A. 2021. PMID: 34625491 Free PMC article.

8

Topological approximate Bayesian computation for parameter inference of an angiogenesis model.

Thorne T, Kirk PDW, Harrington HA. Thorne T, et al. Among authors: harrington ha. Bioinformatics. 2022 Apr 28;38(9):2529-2535. doi: 10.1093/bioinformatics/btac118. Bioinformatics. 2022. PMID: 35191485 Free PMC article.

9

Persistent homology of time-dependent functional networks constructed from coupled time series.

Stolz BJ, Harrington HA, Porter MA. Stolz BJ, et al. Among authors: harrington ha. Chaos. 2017 Apr;27(4):047410. doi: 10.1063/1.4978997. Chaos. 2017. PMID: 28456167

10

Topological data analysis distinguishes parameter regimes in the Anderson-Chaplain model of angiogenesis.

Nardini JT, Stolz BJ, Flores KB, Harrington HA, Byrne HM. Nardini JT, et al. Among authors: harrington ha. PLoS Comput Biol. 2021 Jun 28;17(6):e1009094. doi: 10.1371/journal.pcbi.1009094. eCollection 2021 Jun. PLoS Comput Biol. 2021. PMID: 34181657 Free PMC article.

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