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Molecular basis for nuclear accumulation and targeting of the inhibitor of apoptosis BIRC2.
Tencer AH, Yu Y, Causse SZ, Campbell GR, Klein BJ, Xuan H, Cartier J, Miles MA, Gaurav N, Zadoroznyj A, Holt TA, Wen H, Hawkins CJ, Spector SA, Dubrez L, Shi X, Kutateladze TG. Tencer AH, et al. Among authors: shi x. Nat Struct Mol Biol. 2023 Sep;30(9):1265-1274. doi: 10.1038/s41594-023-01044-1. Epub 2023 Jul 31. Nat Struct Mol Biol. 2023. PMID: 37524969 Free PMC article.
ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression.
Shi X, Hong T, Walter KL, Ewalt M, Michishita E, Hung T, Carney D, Peña P, Lan F, Kaadige MR, Lacoste N, Cayrou C, Davrazou F, Saha A, Cairns BR, Ayer DE, Kutateladze TG, Shi Y, Côté J, Chua KF, Gozani O. Shi X, et al. Among authors: shi y. Nature. 2006 Jul 6;442(7098):96-9. doi: 10.1038/nature04835. Epub 2006 May 21. Nature. 2006. PMID: 16728974 Free PMC article.
Proteome-wide analysis in Saccharomyces cerevisiae identifies several PHD fingers as novel direct and selective binding modules of histone H3 methylated at either lysine 4 or lysine 36.
Shi X, Kachirskaia I, Walter KL, Kuo JH, Lake A, Davrazou F, Chan SM, Martin DG, Fingerman IM, Briggs SD, Howe L, Utz PJ, Kutateladze TG, Lugovskoy AA, Bedford MT, Gozani O. Shi X, et al. J Biol Chem. 2007 Jan 26;282(4):2450-5. doi: 10.1074/jbc.C600286200. Epub 2006 Dec 1. J Biol Chem. 2007. PMID: 17142463 Free PMC article.
Lysine methylation: beyond histones.
Zhang X, Wen H, Shi X. Zhang X, et al. Among authors: shi x. Acta Biochim Biophys Sin (Shanghai). 2012 Jan;44(1):14-27. doi: 10.1093/abbs/gmr100. Acta Biochim Biophys Sin (Shanghai). 2012. PMID: 22194010 Free article. Review.
The histone-H3K4-specific demethylase KDM5B binds to its substrate and product through distinct PHD fingers.
Klein BJ, Piao L, Xi Y, Rincon-Arano H, Rothbart SB, Peng D, Wen H, Larson C, Zhang X, Zheng X, Cortazar MA, Peña PV, Mangan A, Bentley DL, Strahl BD, Groudine M, Li W, Shi X, Kutateladze TG. Klein BJ, et al. Among authors: shi x. Cell Rep. 2014 Jan 30;6(2):325-35. doi: 10.1016/j.celrep.2013.12.021. Epub 2014 Jan 9. Cell Rep. 2014. PMID: 24412361 Free PMC article.
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