Kojima C - Search Results

1

Hydrogen bonds connecting the N-terminal region and the DE loop stabilize the monomeric structure of transthyretin.

Inada Y, Ono Y, Okazaki K, Yamashita T, Kawaguchi T, Kawano S, Kobashigawa Y, Shinya S, Kojima C, Shuto T, Kai H, Morioka H, Sato T. Inada Y, et al. Among authors: kojima c. J Biochem. 2023 Sep 29;174(4):355-370. doi: 10.1093/jb/mvad049. J Biochem. 2023. PMID: 37400978

2

Linker region of a halobacterial transducer protein interacts directly with its sensor retinal protein.

Sudo Y, Okuda H, Yamabi M, Fukuzaki Y, Mishima M, Kamo N, Kojima C. Sudo Y, et al. Among authors: kojima c. Biochemistry. 2005 Apr 26;44(16):6144-52. doi: 10.1021/bi047573z. Biochemistry. 2005. PMID: 15835902

3

NMR line shape analysis of a multi-state ligand binding mechanism in chitosanase.

Shinya S, Ghinet MG, Brzezinski R, Furuita K, Kojima C, Shah S, Kovrigin EL, Fukamizo T. Shinya S, et al. Among authors: kojima c. J Biomol NMR. 2017 Apr;67(4):309-319. doi: 10.1007/s10858-017-0109-6. Epub 2017 Apr 9. J Biomol NMR. 2017. PMID: 28393280

4

Production of Single-Chain Fv Antibodies Specific for GA-Pyridine, an Advanced Glycation End-Product (AGE), with Reduced Inter-Domain Motion.

Fukuda N, Noi K, Weng L, Kobashigawa Y, Miyazaki H, Wakeyama Y, Takaki M, Nakahara Y, Tatsuno Y, Uchida-Kamekura M, Suwa Y, Sato T, Ichikawa-Tomikawa N, Nomizu M, Fujiwara Y, Ohsaka F, Saitoh T, Maenaka K, Kumeta H, Shinya S, Kojima C, Ogura T, Morioka H. Fukuda N, et al. Among authors: kojima c. Molecules. 2017 Oct 10;22(10):1695. doi: 10.3390/molecules22101695. Molecules. 2017. PMID: 28994732 Free PMC article.

5

Amino Acid Selective ¹³C Labeling and ¹³C Scrambling Profile Analysis of Protein α and Side-Chain Carbons in Escherichia coli Utilized for Protein Nuclear Magnetic Resonance.

Sugiki T, Furuita K, Fujiwara T, Kojima C. Sugiki T, et al. Among authors: kojima c. Biochemistry. 2018 Jul 3;57(26):3576-3589. doi: 10.1021/acs.biochem.8b00182. Epub 2018 Jun 20. Biochemistry. 2018. PMID: 29924600

6

Noise peak filtering in multi-dimensional NMR spectra using convolutional neural networks.

Kobayashi N, Hattori Y, Nagata T, Shinya S, Güntert P, Kojima C, Fujiwara T. Kobayashi N, et al. Among authors: kojima c. Bioinformatics. 2018 Dec 15;34(24):4300-4301. doi: 10.1093/bioinformatics/bty581. Bioinformatics. 2018. PMID: 29985974

7

Crystal contact-free conformation of an intrinsically flexible loop in protein crystal: Tim21 as the case study.

Bala S, Shinya S, Srivastava A, Ishikawa M, Shimada A, Kobayashi N, Kojima C, Tama F, Miyashita O, Kohda D. Bala S, et al. Among authors: kojima c. Biochim Biophys Acta Gen Subj. 2020 Feb;1864(2):129418. doi: 10.1016/j.bbagen.2019.129418. Epub 2019 Aug 23. Biochim Biophys Acta Gen Subj. 2020. PMID: 31449839

8

Multifunctional chemical inhibitors of the florigen activation complex discovered by structure-based high-throughput screening.

Taoka KI, Kawahara I, Shinya S, Harada KI, Yamashita E, Shimatani Z, Furuita K, Muranaka T, Oyama T, Terada R, Nakagawa A, Fujiwara T, Tsuji H, Kojima C. Taoka KI, et al. Among authors: kojima c. Plant J. 2022 Dec;112(6):1337-1349. doi: 10.1111/tpj.16008. Epub 2022 Nov 16. Plant J. 2022. PMID: 36288411 Free article.

9

¹⁹F chemical library and ¹⁹F-NMR for a weakly bound complex structure.

Shinya S, Katahira R, Furuita K, Sugiki T, Lee YH, Hattori Y, Takeshita K, Nakagawa A, Kokago A, Akagi KI, Oouchi M, Hayashi F, Kigawa T, Takimoto-Kamimura M, Fujiwara T, Kojima C. Shinya S, et al. Among authors: kojima c. RSC Med Chem. 2022 Jul 22;13(9):1100-1111. doi: 10.1039/d2md00170e. eCollection 2022 Sep 21. RSC Med Chem. 2022. PMID: 36324497 Free PMC article.

10

Solution Strucutres of DNA duplexes containing a DNA x RNA hybrid region, d(GG)r(AGAU)d(GAC) x d(GTCATCTCC) and d(GGAGA)r(UGAC) x d(GTCATCTCC).

Nishizaki T, Iwai S, Ohkubo T, Kojima C, Nakamura H, Kyogoku Y, Ohtsuka E. Nishizaki T, et al. Among authors: kojima c. Biochemistry. 1996 Apr 2;35(13):4016-25. doi: 10.1021/bi9519821. Biochemistry. 1996. PMID: 8672435

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