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Page 1
Metagenomics: The Next Culture-Independent Game Changer.
Forbes JD, Knox NC, Ronholm J, Pagotto F, Reimer A. Forbes JD, et al. Among authors: pagotto f. Front Microbiol. 2017 Jul 4;8:1069. doi: 10.3389/fmicb.2017.01069. eCollection 2017. Front Microbiol. 2017. PMID: 28725217 Free PMC article. Review.
Shared genome analyses of notable listeriosis outbreaks, highlighting the critical importance of epidemiological evidence, input datasets and interpretation criteria.
Reimer A, Weedmark K, Petkau A, Peterson CL, Walker M, Knox N, Kent H, Mabon P, Berry C, Tyler S, Tschetter L, Jerome M, Allen V, Hoang L, Bekal S, Clark C, Nadon C, Van Domselaar G, Pagotto F, Graham M, Farber J, Gilmour M. Reimer A, et al. Among authors: pagotto f. Microb Genom. 2019 Jan;5(1):e000237. doi: 10.1099/mgen.0.000237. Epub 2019 Jan 16. Microb Genom. 2019. PMID: 30648944 Free PMC article.
Multi-Province Listeriosis Outbreak Linked to Contaminated Deli Meat Consumed Primarily in Institutional Settings, Canada, 2008.
Currie A, Farber JM, Nadon C, Sharma D, Whitfield Y, Gaulin C, Galanis E, Bekal S, Flint J, Tschetter L, Pagotto F, Lee B, Jamieson F, Badiani T, MacDonald D, Ellis A, May-Hadford J, McCormick R, Savelli C, Middleton D, Allen V, Tremblay FW, MacDougall L, Hoang L, Shyng S, Everett D, Chui L, Louie M, Bangura H, Levett PN, Wilkinson K, Wylie J, Reid J, Major B, Engel D, Douey D, Huszczynski G, Di Lecci J, Strazds J, Rousseau J, Ma K, Isaac L, Sierpinska U. Currie A, et al. Among authors: pagotto f. Foodborne Pathog Dis. 2015 Aug;12(8):645-52. doi: 10.1089/fpd.2015.1939. Epub 2015 Jun 3. Foodborne Pathog Dis. 2015. PMID: 26258258
Surveillance for Listeria monocytogenes and listeriosis, 1995-2004.
Clark CG, Farber J, Pagotto F, Ciampa N, Doré K, Nadon C, Bernard K, Ng LK; CPHLN. Clark CG, et al. Among authors: pagotto f. Epidemiol Infect. 2010 Apr;138(4):559-72. doi: 10.1017/S0950268809990914. Epub 2009 Oct 12. Epidemiol Infect. 2010. PMID: 19818199
Sequence typing confirms that a predominant Listeria monocytogenes clone caused human listeriosis cases and outbreaks in Canada from 1988 to 2010.
Knabel SJ, Reimer A, Verghese B, Lok M, Ziegler J, Farber J, Pagotto F, Graham M, Nadon CA; Canadian Public Health Laboratory Network (CPHLN); Gilmour MW. Knabel SJ, et al. Among authors: pagotto f. J Clin Microbiol. 2012 May;50(5):1748-51. doi: 10.1128/JCM.06185-11. Epub 2012 Feb 15. J Clin Microbiol. 2012. PMID: 22337989 Free PMC article.
Neptune: a bioinformatics tool for rapid discovery of genomic variation in bacterial populations.
Marinier E, Zaheer R, Berry C, Weedmark KA, Domaratzki M, Mabon P, Knox NC, Reimer AR, Graham MR, Chui L, Patterson-Fortin L, Zhang J, Pagotto F, Farber J, Mahony J, Seyer K, Bekal S, Tremblay C, Isaac-Renton J, Prystajecky N, Chen J, Slade P, Van Domselaar G. Marinier E, et al. Among authors: pagotto f. Nucleic Acids Res. 2017 Oct 13;45(18):e159. doi: 10.1093/nar/gkx702. Nucleic Acids Res. 2017. PMID: 29048594 Free PMC article.
Subtyping of a large collection of historical Listeria monocytogenes strains from Ontario, Canada, by an improved multilocus variable-number tandem-repeat analysis (MLVA).
Saleh-Lakha S, Allen VG, Li J, Pagotto F, Odumeru J, Taboada E, Lombos M, Tabing KC, Blais B, Ogunremi D, Downing G, Lee S, Gao A, Nadon C, Chen S. Saleh-Lakha S, et al. Among authors: pagotto f. Appl Environ Microbiol. 2013 Oct;79(20):6472-80. doi: 10.1128/AEM.00759-13. Epub 2013 Aug 16. Appl Environ Microbiol. 2013. PMID: 23956391 Free PMC article.
79 results