Karatzas E - Search Results

1

Arena3D^web: interactive 3D visualization of multilayered networks supporting multiple directional information channels, clustering analysis and application integration.

Kokoli M, Karatzas E, Baltoumas FA, Schneider R, Pafilis E, Paragkamian S, Doncheva NT, Jensen LJ, Pavlopoulos GA. Kokoli M, et al. Among authors: karatzas e. NAR Genom Bioinform. 2023 May 30;5(2):lqad053. doi: 10.1093/nargab/lqad053. eCollection 2023 Jun. NAR Genom Bioinform. 2023. PMID: 37260509 Free PMC article.

2

A Web Tool for Ranking Candidate Drugs Against a Selected Disease Based on a Combination of Functional and Structural Criteria.

Karatzas E, Minadakis G, Kolios G, Delis A, Spyrou GM. Karatzas E, et al. Comput Struct Biotechnol J. 2019 Jun 29;17:939-945. doi: 10.1016/j.csbj.2019.05.010. eCollection 2019. Comput Struct Biotechnol J. 2019. PMID: 31360332 Free PMC article.

3

An Application of Computational Drug Repurposing Based on Transcriptomic Signatures.

Karatzas E, Kolios G, Spyrou GM. Karatzas E, et al. Methods Mol Biol. 2019;1903:149-177. doi: 10.1007/978-1-4939-8955-3_9. Methods Mol Biol. 2019. PMID: 30547441

4

Drug repurposing in idiopathic pulmonary fibrosis filtered by a bioinformatics-derived composite score.

Karatzas E, Bourdakou MM, Kolios G, Spyrou GM. Karatzas E, et al. Sci Rep. 2017 Oct 3;7(1):12569. doi: 10.1038/s41598-017-12849-8. Sci Rep. 2017. PMID: 28974751 Free PMC article.

5

Fibrotic expression profile analysis reveals repurposed drugs with potential anti-fibrotic mode of action.

Karatzas E, Kakouri AC, Kolios G, Delis A, Spyrou GM. Karatzas E, et al. PLoS One. 2021 Apr 7;16(4):e0249687. doi: 10.1371/journal.pone.0249687. eCollection 2021. PLoS One. 2021. PMID: 33826640 Free PMC article.

6

A Guide to Conquer the Biological Network Era Using Graph Theory.

Koutrouli M, Karatzas E, Paez-Espino D, Pavlopoulos GA. Koutrouli M, et al. Among authors: karatzas e. Front Bioeng Biotechnol. 2020 Jan 31;8:34. doi: 10.3389/fbioe.2020.00034. eCollection 2020. Front Bioeng Biotechnol. 2020. PMID: 32083072 Free PMC article. Review.

7

Arena3Dweb: interactive 3D visualization of multilayered networks.

Karatzas E, Baltoumas FA, Panayiotou NA, Schneider R, Pavlopoulos GA. Karatzas E, et al. Nucleic Acids Res. 2021 Jul 2;49(W1):W36-W45. doi: 10.1093/nar/gkab278. Nucleic Acids Res. 2021. PMID: 33885790 Free PMC article.

8

VICTOR: A visual analytics web application for comparing cluster sets.

Karatzas E, Gkonta M, Hotova J, Baltoumas FA, Kontou PI, Bobotsis CJ, Bagos PG, Pavlopoulos GA. Karatzas E, et al. Comput Biol Med. 2021 Aug;135:104557. doi: 10.1016/j.compbiomed.2021.104557. Epub 2021 Jun 8. Comput Biol Med. 2021. PMID: 34139436

9

NORMA: The Network Makeup Artist - A Web Tool for Network Annotation Visualization.

Koutrouli M, Karatzas E, Papanikolopoulou K, Pavlopoulos GA. Koutrouli M, et al. Among authors: karatzas e. Genomics Proteomics Bioinformatics. 2022 Jun;20(3):578-586. doi: 10.1016/j.gpb.2021.02.005. Epub 2021 Jun 24. Genomics Proteomics Bioinformatics. 2022. PMID: 34171457 Free PMC article.

10

FLAME: A Web Tool for Functional and Literature Enrichment Analysis of Multiple Gene Lists.

Thanati F, Karatzas E, Baltoumas FA, Stravopodis DJ, Eliopoulos AG, Pavlopoulos GA. Thanati F, et al. Among authors: karatzas e. Biology (Basel). 2021 Jul 14;10(7):665. doi: 10.3390/biology10070665. Biology (Basel). 2021. PMID: 34356520 Free PMC article.

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