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Page 1
Rapid viral metagenomics using SMART-9N amplification and nanopore sequencing.
Claro IM, Ramundo MS, Coletti TM, da Silva CAM, Valenca IN, Candido DS, Sales FCS, Manuli ER, de Jesus JG, de Paula A, Felix AC, Andrade PDS, Pinho MC, Souza WM, Amorim MR, Proenca-Modena JL, Kallas EG, Levi JE, Faria NR, Sabino EC, Loman NJ, Quick J. Claro IM, et al. Among authors: souza wm. Wellcome Open Res. 2023 Apr 24;6:241. doi: 10.12688/wellcomeopenres.17170.2. eCollection 2021. Wellcome Open Res. 2023. PMID: 37224315 Free PMC article.
Evolution and epidemic spread of SARS-CoV-2 in Brazil.
Candido DS, Claro IM, de Jesus JG, Souza WM, Moreira FRR, Dellicour S, Mellan TA, du Plessis L, Pereira RHM, Sales FCS, Manuli ER, Thézé J, Almeida L, Menezes MT, Voloch CM, Fumagalli MJ, Coletti TM, da Silva CAM, Ramundo MS, Amorim MR, Hoeltgebaum HH, Mishra S, Gill MS, Carvalho LM, Buss LF, Prete CA Jr, Ashworth J, Nakaya HI, Peixoto PS, Brady OJ, Nicholls SM, Tanuri A, Rossi ÁD, Braga CKV, Gerber AL, de C Guimarães AP, Gaburo N Jr, Alencar CS, Ferreira ACS, Lima CX, Levi JE, Granato C, Ferreira GM, Francisco RS Jr, Granja F, Garcia MT, Moretti ML, Perroud MW Jr, Castiñeiras TMPP, Lazari CS, Hill SC, de Souza Santos AA, Simeoni CL, Forato J, Sposito AC, Schreiber AZ, Santos MNN, de Sá CZ, Souza RP, Resende-Moreira LC, Teixeira MM, Hubner J, Leme PAF, Moreira RG, Nogueira ML; Brazil-UK Centre for Arbovirus Discovery, Diagnosis, Genomics and Epidemiology (CADDE) Genomic Network; Ferguson NM, Costa SF, Proenca-Modena JL, Vasconcelos ATR, Bhatt S, Lemey P, Wu CH, Rambaut A, Loman NJ, Aguiar RS, Pybus OG, Sabino EC, Faria NR. Candido DS, et al. Among authors: souza wm, souza rp. Science. 2020 Sep 4;369(6508):1255-1260. doi: 10.1126/science.abd2161. Epub 2020 Jul 23. Science. 2020. PMID: 32703910 Free PMC article.
Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil.
Faria NR, Mellan TA, Whittaker C, Claro IM, Candido DDS, Mishra S, Crispim MAE, Sales FCS, Hawryluk I, McCrone JT, Hulswit RJG, Franco LAM, Ramundo MS, de Jesus JG, Andrade PS, Coletti TM, Ferreira GM, Silva CAM, Manuli ER, Pereira RHM, Peixoto PS, Kraemer MUG, Gaburo N Jr, Camilo CDC, Hoeltgebaum H, Souza WM, Rocha EC, de Souza LM, de Pinho MC, Araujo LJT, Malta FSV, de Lima AB, Silva JDP, Zauli DAG, Ferreira ACS, Schnekenberg RP, Laydon DJ, Walker PGT, Schlüter HM, Dos Santos ALP, Vidal MS, Del Caro VS, Filho RMF, Dos Santos HM, Aguiar RS, Proença-Modena JL, Nelson B, Hay JA, Monod M, Miscouridou X, Coupland H, Sonabend R, Vollmer M, Gandy A, Prete CA Jr, Nascimento VH, Suchard MA, Bowden TA, Pond SLK, Wu CH, Ratmann O, Ferguson NM, Dye C, Loman NJ, Lemey P, Rambaut A, Fraiji NA, Carvalho MDPSS, Pybus OG, Flaxman S, Bhatt S, Sabino EC. Faria NR, et al. Among authors: souza wm. Science. 2021 May 21;372(6544):815-821. doi: 10.1126/science.abh2644. Epub 2021 Apr 14. Science. 2021. PMID: 33853970 Free PMC article.
Understanding Sabiá virus infections (Brazilian mammarenavirus).
Nastri AC, Duarte-Neto AN, Casadio LVB, Souza WM, Claro IM, Manuli ER, Selegatto G, Salomão MC, Fialkovitz G, Taborda M, Almeida BL, Magri MC, Guedes AR, Perdigão Neto LV, Sataki FM, Guimarães T, Mendes-Correa MC, Tozetto-Mendoza TR, Fumagalli MJ, Ho YL, Maia da Silva CA, Coletti TM, Goes de Jesus J, Romano CM, Hill SC, Pybus O, Rebello Pinho JR, Ledesma FL, Casal YR, Kanamura CT, Tadeu de Araújo LJ, Ferreira CSDS, Guerra JM, Figueiredo LTM, Dolhnikoff M, Faria NR, Sabino EC, Alves VAF, Levin AS. Nastri AC, et al. Among authors: souza wm. Travel Med Infect Dis. 2022 Jul-Aug;48:102351. doi: 10.1016/j.tmaid.2022.102351. Epub 2022 May 7. Travel Med Infect Dis. 2022. PMID: 35537676
Epidemiological and genomic investigation of chikungunya virus in Rio de Janeiro state, Brazil, between 2015 and 2018.
Moreira FRR, Menezes MT, Salgado-Benvindo C, Whittaker C, Cox V, Chandradeva N, Paula HHS, Martins AF, Chagas RRD, Brasil RDV, Cândido DDS, Herlinger AL, Ribeiro MO, Arruda MB, Alvarez P, Tôrres MCP, Dorigatti I, Brady O, Voloch CM, Tanuri A, Iani F, Souza WM, Cardozo SV, Faria NR, Aguiar RS. Moreira FRR, et al. Among authors: souza wm. PLoS Negl Trop Dis. 2023 Sep 28;17(9):e0011536. doi: 10.1371/journal.pntd.0011536. eCollection 2023 Sep. PLoS Negl Trop Dis. 2023. PMID: 37769008 Free PMC article.
A real-time reverse transcriptase polymerase chain reaction for detection and quantification of Vesiculovirus.
Tolardo AL, Souza WM, Romeiro MF, Vieira LC, Luna LK, Henriques DA, Araujo Jd, Siqueira CE, Colombo TE, Aquino VH, Fonseca BA, Bronzoni RV, Nogueira ML, Durigon EL, Figueiredo LT. Tolardo AL, et al. Among authors: souza wm. Mem Inst Oswaldo Cruz. 2016 Jun 3;111(6):385-90. doi: 10.1590/0074-02760150456. Mem Inst Oswaldo Cruz. 2016. PMID: 27276185 Free PMC article.
Characterization of the Bujaru, frijoles and Tapara antigenic complexes into the sandfly fever group and two unclassified phleboviruses from Brazil.
Nunes-Neto JP, Souza WM, Acrani GO, Romeiro MF, Fumagalli M, Vieira LC, Medeiros DBA, Lima JA, Lima CPS, Cardoso JF, Figueiredo LTM, Silva SPD, Tesh R, Nunes MRT, Vasconcelos PFDC. Nunes-Neto JP, et al. Among authors: souza wm. J Gen Virol. 2017 Apr;98(4):585-594. doi: 10.1099/jgv.0.000724. Epub 2017 May 5. J Gen Virol. 2017. PMID: 28141497
131 results