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Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus.
Quinodoz SA, Ollikainen N, Tabak B, Palla A, Schmidt JM, Detmar E, Lai MM, Shishkin AA, Bhat P, Takei Y, Trinh V, Aznauryan E, Russell P, Cheng C, Jovanovic M, Chow A, Cai L, McDonel P, Garber M, Guttman M. Quinodoz SA, et al. Among authors: cai l. Cell. 2018 Jul 26;174(3):744-757.e24. doi: 10.1016/j.cell.2018.05.024. Epub 2018 Jun 7. Cell. 2018. PMID: 29887377 Free PMC article.
The adult human testis transcriptional cell atlas.
Guo J, Grow EJ, Mlcochova H, Maher GJ, Lindskog C, Nie X, Guo Y, Takei Y, Yun J, Cai L, Kim R, Carrell DT, Goriely A, Hotaling JM, Cairns BR. Guo J, et al. Among authors: cai l. Cell Res. 2018 Dec;28(12):1141-1157. doi: 10.1038/s41422-018-0099-2. Epub 2018 Oct 12. Cell Res. 2018. PMID: 30315278 Free PMC article.
Transcriptome-scale super-resolved imaging in tissues by RNA seqFISH.
Eng CL, Lawson M, Zhu Q, Dries R, Koulena N, Takei Y, Yun J, Cronin C, Karp C, Yuan GC, Cai L. Eng CL, et al. Among authors: cai l. Nature. 2019 Apr;568(7751):235-239. doi: 10.1038/s41586-019-1049-y. Epub 2019 Mar 25. Nature. 2019. PMID: 30911168 Free PMC article.
Integrated spatial genomics reveals global architecture of single nuclei.
Takei Y, Yun J, Zheng S, Ollikainen N, Pierson N, White J, Shah S, Thomassie J, Suo S, Eng CL, Guttman M, Yuan GC, Cai L. Takei Y, et al. Among authors: cai l. Nature. 2021 Feb;590(7845):344-350. doi: 10.1038/s41586-020-03126-2. Epub 2021 Jan 27. Nature. 2021. PMID: 33505024 Free PMC article.
Single-cell nuclear architecture across cell types in the mouse brain.
Takei Y, Zheng S, Yun J, Shah S, Pierson N, White J, Schindler S, Tischbirek CH, Yuan GC, Cai L. Takei Y, et al. Among authors: cai l. Science. 2021 Oct 29;374(6567):586-594. doi: 10.1126/science.abj1966. Epub 2021 Sep 30. Science. 2021. PMID: 34591592
Spatial transcriptomics defines injury-specific microenvironments in the adult mouse kidney and novel cellular interactions in regeneration and disease.
Polonsky M, Gerhardt LMS, Yun J, Koppitch K, Colón KL, Amrhein H, Zheng S, Yuan GC, Thomson M, Cai L, McMahon AP. Polonsky M, et al. Among authors: cai l. bioRxiv [Preprint]. 2023 Nov 22:2023.11.22.568217. doi: 10.1101/2023.11.22.568217. bioRxiv. 2023. Update in: Nat Commun. 2024 Sep 5;15(1):7010. doi: 10.1038/s41467-024-51186-z PMID: 38045285 Free PMC article. Updated. Preprint.
8,193 results