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A leaky integrate-and-fire computational model based on the connectome of the entire adult Drosophila brain reveals insights into sensorimotor processing.
Shiu PK, Sterne GR, Spiller N, Franconville R, Sandoval A, Zhou J, Simha N, Kang CH, Yu S, Kim JS, Dorkenwald S, Matsliah A, Schlegel P, Szi-Chieh Y, McKellar CE, Sterling A, Costa M, Eichler K, Jefferis GSXE, Murthy M, Bates AS, Eckstein N, Funke J, Bidaye SS, Hampel S, Seeds AM, Scott K. Shiu PK, et al. Among authors: kim js. bioRxiv [Preprint]. 2023 May 2:2023.05.02.539144. doi: 10.1101/2023.05.02.539144. bioRxiv. 2023. Update in: Nature. 2024 Oct;634(8032):210-219. doi: 10.1038/s41586-024-07763-9 PMID: 37205514 Free PMC article. Updated. Preprint.
A Drosophila computational brain model reveals sensorimotor processing.
Shiu PK, Sterne GR, Spiller N, Franconville R, Sandoval A, Zhou J, Simha N, Kang CH, Yu S, Kim JS, Dorkenwald S, Matsliah A, Schlegel P, Yu SC, McKellar CE, Sterling A, Costa M, Eichler K, Bates AS, Eckstein N, Funke J, Jefferis GSXE, Murthy M, Bidaye SS, Hampel S, Seeds AM, Scott K. Shiu PK, et al. Among authors: kim js. Nature. 2024 Oct;634(8032):210-219. doi: 10.1038/s41586-024-07763-9. Epub 2024 Oct 2. Nature. 2024. PMID: 39358519 Free PMC article.
Neuronal wiring diagram of an adult brain.
Dorkenwald S, Matsliah A, Sterling AR, Schlegel P, Yu SC, McKellar CE, Lin A, Costa M, Eichler K, Yin Y, Silversmith W, Schneider-Mizell C, Jordan CS, Brittain D, Halageri A, Kuehner K, Ogedengbe O, Morey R, Gager J, Kruk K, Perlman E, Yang R, Deutsch D, Bland D, Sorek M, Lu R, Macrina T, Lee K, Bae JA, Mu S, Nehoran B, Mitchell E, Popovych S, Wu J, Jia Z, Castro MA, Kemnitz N, Ih D, Bates AS, Eckstein N, Funke J, Collman F, Bock DD, Jefferis GSXE, Seung HS, Murthy M; FlyWire Consortium. Dorkenwald S, et al. Nature. 2024 Oct;634(8032):124-138. doi: 10.1038/s41586-024-07558-y. Epub 2024 Oct 2. Nature. 2024. PMID: 39358518 Free PMC article.
Whole-brain annotation and multi-connectome cell typing of Drosophila.
Schlegel P, Yin Y, Bates AS, Dorkenwald S, Eichler K, Brooks P, Han DS, Gkantia M, Dos Santos M, Munnelly EJ, Badalamente G, Serratosa Capdevila L, Sane VA, Fragniere AMC, Kiassat L, Pleijzier MW, Stürner T, Tamimi IFM, Dunne CR, Salgarella I, Javier A, Fang S, Perlman E, Kazimiers T, Jagannathan SR, Matsliah A, Sterling AR, Yu SC, McKellar CE; FlyWire Consortium; Costa M, Seung HS, Murthy M, Hartenstein V, Bock DD, Jefferis GSXE. Schlegel P, et al. Nature. 2024 Oct;634(8032):139-152. doi: 10.1038/s41586-024-07686-5. Epub 2024 Oct 2. Nature. 2024. PMID: 39358521 Free PMC article.
Digital Museum of Retinal Ganglion Cells with Dense Anatomy and Physiology.
Bae JA, Mu S, Kim JS, Turner NL, Tartavull I, Kemnitz N, Jordan CS, Norton AD, Silversmith WM, Prentki R, Sorek M, David C, Jones DL, Bland D, Sterling ALR, Park J, Briggman KL, Seung HS; Eyewirers. Bae JA, et al. Among authors: kim js. Cell. 2018 May 17;173(5):1293-1306.e19. doi: 10.1016/j.cell.2018.04.040. Cell. 2018. PMID: 29775596 Free PMC article.
Comparative connectomics of dauer reveals developmental plasticity.
Yim H, Choe DT, Bae JA, Choi MK, Kang HM, Nguyen KCQ, Ahn S, Bahn SK, Yang H, Hall DH, Kim JS, Lee J. Yim H, et al. Among authors: kim js. Nat Commun. 2024 Feb 27;15(1):1546. doi: 10.1038/s41467-024-45943-3. Nat Commun. 2024. PMID: 38413604 Free PMC article.
Automated Synapse Detection Method for Cerebellar Connectomics.
Park C, Gim J, Lee S, Lee KJ, Kim JS. Park C, et al. Among authors: kim js. Front Neuroanat. 2022 Mar 11;16:760279. doi: 10.3389/fnana.2022.760279. eCollection 2022. Front Neuroanat. 2022. PMID: 35360651 Free PMC article.
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