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A leaky integrate-and-fire computational model based on the connectome of the entire adult Drosophila brain reveals insights into sensorimotor processing.
Shiu PK, Sterne GR, Spiller N, Franconville R, Sandoval A, Zhou J, Simha N, Kang CH, Yu S, Kim JS, Dorkenwald S, Matsliah A, Schlegel P, Szi-Chieh Y, McKellar CE, Sterling A, Costa M, Eichler K, Jefferis GSXE, Murthy M, Bates AS, Eckstein N, Funke J, Bidaye SS, Hampel S, Seeds AM, Scott K. Shiu PK, et al. Among authors: funke j. bioRxiv [Preprint]. 2023 May 2:2023.05.02.539144. doi: 10.1101/2023.05.02.539144. bioRxiv. 2023. Update in: Nature. 2024 Oct;634(8032):210-219. doi: 10.1038/s41586-024-07763-9 PMID: 37205514 Free PMC article. Updated. Preprint.
Automatic detection of synaptic partners in a whole-brain Drosophila electron microscopy data set.
Buhmann J, Sheridan A, Malin-Mayor C, Schlegel P, Gerhard S, Kazimiers T, Krause R, Nguyen TM, Heinrich L, Lee WA, Wilson R, Saalfeld S, Jefferis GSXE, Bock DD, Turaga SC, Cook M, Funke J. Buhmann J, et al. Among authors: funke j. Nat Methods. 2021 Jul;18(7):771-774. doi: 10.1038/s41592-021-01183-7. Epub 2021 Jun 24. Nat Methods. 2021. PMID: 34168373 Free PMC article.
Neural network organization for courtship-song feature detection in Drosophila.
Baker CA, McKellar C, Pang R, Nern A, Dorkenwald S, Pacheco DA, Eckstein N, Funke J, Dickson BJ, Murthy M. Baker CA, et al. Among authors: funke j. Curr Biol. 2022 Aug 8;32(15):3317-3333.e7. doi: 10.1016/j.cub.2022.06.019. Epub 2022 Jul 5. Curr Biol. 2022. PMID: 35793679 Free PMC article.
Network Statistics of the Whole-Brain Connectome of Drosophila.
Lin A, Yang R, Dorkenwald S, Matsliah A, Sterling AR, Schlegel P, Yu SC, McKellar CE, Costa M, Eichler K, Bates AS, Eckstein N, Funke J, Jefferis GSXE, Murthy M. Lin A, et al. Among authors: funke j. bioRxiv [Preprint]. 2024 Feb 28:2023.07.29.551086. doi: 10.1101/2023.07.29.551086. bioRxiv. 2024. Update in: Nature. 2024 Oct;634(8032):153-165. doi: 10.1038/s41586-024-07968-y PMID: 37547019 Free PMC article. Updated. Preprint.
Connectome-driven neural inventory of a complete visual system.
Nern A, Loesche F, Takemura SY, Burnett LE, Dreher M, Gruntman E, Hoeller J, Huang GB, Januszewski M, Klapoetke NC, Koskela S, Longden KD, Lu Z, Preibisch S, Qiu W, Rogers EM, Seenivasan P, Zhao A, Bogovic J, Canino BS, Clements J, Cook M, Finley-May S, Flynn MA, Hameed I, Fragniere AM, Hayworth KJ, Hopkins GP, Hubbard PM, Katz WT, Kovalyak J, Lauchie SA, Leonard M, Lohff A, Maldonado CA, Mooney C, Okeoma N, Olbris DJ, Ordish C, Paterson T, Phillips EM, Pietzsch T, Salinas JR, Rivlin PK, Schlegel P, Scott AL, Scuderi LA, Takemura S, Talebi I, Thomson A, Trautman ET, Umayam L, Walsh C, Walsh JJ, Xu CS, Yakal EA, Yang T, Zhao T, Funke J, George R, Hess HF, Jefferis GS, Knecht C, Korff W, Plaza SM, Romani S, Saalfeld S, Scheffer LK, Berg S, Rubin GM, Reiser MB. Nern A, et al. Among authors: funke j. bioRxiv [Preprint]. 2024 Jun 1:2024.04.16.589741. doi: 10.1101/2024.04.16.589741. bioRxiv. 2024. PMID: 38659887 Free PMC article. Preprint.
Neurotransmitter classification from electron microscopy images at synaptic sites in Drosophila melanogaster.
Eckstein N, Bates AS, Champion A, Du M, Yin Y, Schlegel P, Lu AK, Rymer T, Finley-May S, Paterson T, Parekh R, Dorkenwald S, Matsliah A, Yu SC, McKellar C, Sterling A, Eichler K, Costa M, Seung S, Murthy M, Hartenstein V, Jefferis GSXE, Funke J. Eckstein N, et al. Among authors: funke j. Cell. 2024 May 9;187(10):2574-2594.e23. doi: 10.1016/j.cell.2024.03.016. Cell. 2024. PMID: 38729112 Free PMC article.
A Drosophila computational brain model reveals sensorimotor processing.
Shiu PK, Sterne GR, Spiller N, Franconville R, Sandoval A, Zhou J, Simha N, Kang CH, Yu S, Kim JS, Dorkenwald S, Matsliah A, Schlegel P, Yu SC, McKellar CE, Sterling A, Costa M, Eichler K, Bates AS, Eckstein N, Funke J, Jefferis GSXE, Murthy M, Bidaye SS, Hampel S, Seeds AM, Scott K. Shiu PK, et al. Among authors: funke j. Nature. 2024 Oct;634(8032):210-219. doi: 10.1038/s41586-024-07763-9. Epub 2024 Oct 2. Nature. 2024. PMID: 39358519 Free PMC article.
94 results