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Unsupervised representation learning improves genomic discovery and risk prediction for respiratory and circulatory functions and diseases.
Yun T, Cosentino J, Behsaz B, McCaw ZR, Hill D, Luben R, Lai D, Bates J, Yang H, Schwantes-An TH, Zhou Y, Khawaja AP, Carroll A, Hobbs BD, Cho MH, McLean CY, Hormozdiari F. Yun T, et al. medRxiv [Preprint]. 2023 Aug 29:2023.04.28.23289285. doi: 10.1101/2023.04.28.23289285. medRxiv. 2023. Update in: Nat Genet. 2024 Aug;56(8):1604-1613. doi: 10.1038/s41588-024-01831-6 PMID: 37163049 Free PMC article. Updated. Preprint.
Utilizing multimodal AI to improve genetic analyses of cardiovascular traits.
Zhou Y, Cosentino J, Yun T, Biradar MI, Shreibati J, Lai D, Schwantes-An TH, Luben R, McCaw Z, Engmann J, Providencia R, Schmidt AF, Munroe P, Yang H, Carroll A, Khawaja AP, McLean CY, Behsaz B, Hormozdiari F. Zhou Y, et al. Among authors: yun t. medRxiv [Preprint]. 2024 Mar 20:2024.03.19.24304547. doi: 10.1101/2024.03.19.24304547. medRxiv. 2024. PMID: 38562791 Free PMC article. Preprint.
A population-specific reference panel for improved genotype imputation in African Americans.
O'Connell J, Yun T, Moreno M, Li H, Litterman N, Kolesnikov A, Noblin E, Chang PC, Shastri A, Dorfman EH, Shringarpure S; 23andMe Research Team; Auton A, Carroll A, McLean CY. O'Connell J, et al. Among authors: yun t. Commun Biol. 2021 Nov 5;4(1):1269. doi: 10.1038/s42003-021-02777-9. Commun Biol. 2021. PMID: 34741098 Free PMC article.
DeepConsensus improves the accuracy of sequences with a gap-aware sequence transformer.
Baid G, Cook DE, Shafin K, Yun T, Llinares-López F, Berthet Q, Belyaeva A, Töpfer A, Wenger AM, Rowell WJ, Yang H, Kolesnikov A, Ammar W, Vert JP, Vaswani A, McLean CY, Nattestad M, Chang PC, Carroll A. Baid G, et al. Among authors: yun t. Nat Biotechnol. 2023 Feb;41(2):232-238. doi: 10.1038/s41587-022-01435-7. Epub 2022 Sep 1. Nat Biotechnol. 2023. PMID: 36050551
Improving variant calling using population data and deep learning.
Chen NC, Kolesnikov A, Goel S, Yun T, Chang PC, Carroll A. Chen NC, et al. Among authors: yun t. BMC Bioinformatics. 2023 May 12;24(1):197. doi: 10.1186/s12859-023-05294-0. BMC Bioinformatics. 2023. PMID: 37173615 Free PMC article.
822 results