Lyu A - Search Results

1

Accurate and interpretable gene expression imputation on scRNA-seq data using IGSimpute.

Xu K, Cheong C, Veldsman WP, Lyu A, Cheung WK, Zhang L. Xu K, et al. Among authors: lyu a. Brief Bioinform. 2023 May 19;24(3):bbad124. doi: 10.1093/bib/bbad124. Brief Bioinform. 2023. PMID: 37039664

2

DeepDRIM: a deep neural network to reconstruct cell-type-specific gene regulatory network using single-cell RNA-seq data.

Chen J, Cheong C, Lan L, Zhou X, Liu J, Lyu A, Cheung WK, Zhang L. Chen J, et al. Among authors: lyu a. Brief Bioinform. 2021 Nov 5;22(6):bbab325. doi: 10.1093/bib/bbab325. Brief Bioinform. 2021. PMID: 34424948 Free PMC article.

3

dynDeepDRIM: a dynamic deep learning model to infer direct regulatory interactions using time-course single-cell gene expression data.

Xu Y, Chen J, Lyu A, Cheung WK, Zhang L. Xu Y, et al. Among authors: lyu a. Brief Bioinform. 2022 Nov 19;23(6):bbac424. doi: 10.1093/bib/bbac424. Brief Bioinform. 2022. PMID: 36168811

4

Benchmarking multi-platform sequencing technologies for human genome assembly.

Wang J, Veldsman WP, Fang X, Huang Y, Xie X, Lyu A, Zhang L. Wang J, et al. Among authors: lyu a. Brief Bioinform. 2023 Sep 20;24(5):bbad300. doi: 10.1093/bib/bbad300. Brief Bioinform. 2023. PMID: 37594299

5

Exploring high-quality microbial genomes by assembling short-reads with long-range connectivity.

Zhang Z, Xiao J, Wang H, Yang C, Huang Y, Yue Z, Chen Y, Han L, Yin K, Lyu A, Fang X, Zhang L. Zhang Z, et al. Among authors: lyu a. Nat Commun. 2024 May 31;15(1):4631. doi: 10.1038/s41467-024-49060-z. Nat Commun. 2024. PMID: 38821971 Free PMC article.

6

Publisher Correction: Exploring high-quality microbial genomes by assembling short-reads with long-range connectivity.

Zhang Z, Xiao J, Wang H, Yang C, Huang Y, Yue Z, Chen Y, Han L, Yin K, Lyu A, Fang X, Zhang L. Zhang Z, et al. Among authors: lyu a. Nat Commun. 2024 Aug 29;15(1):7493. doi: 10.1038/s41467-024-51890-w. Nat Commun. 2024. PMID: 39209863 Free PMC article. No abstract available.

7

Natural Compounds Targeting the Autophagy Pathway in the Treatment of Colorectal Cancer.

Du YX, Mamun AA, Lyu AP, Zhang HJ. Du YX, et al. Int J Mol Sci. 2023 Apr 15;24(8):7310. doi: 10.3390/ijms24087310. Int J Mol Sci. 2023. PMID: 37108476 Free PMC article. Review.

8

ADMETlab 3.0: an updated comprehensive online ADMET prediction platform enhanced with broader coverage, improved performance, API functionality and decision support.

Fu L, Shi S, Yi J, Wang N, He Y, Wu Z, Peng J, Deng Y, Wang W, Wu C, Lyu A, Zeng X, Zhao W, Hou T, Cao D. Fu L, et al. Among authors: lyu a. Nucleic Acids Res. 2024 Jul 5;52(W1):W422-W431. doi: 10.1093/nar/gkae236. Nucleic Acids Res. 2024. PMID: 38572755 Free PMC article.

9

WHO Trial Registration Data Set (TRDS) extension for traditional Chinese medicine 2020: recommendations, explanation, and elaboration.

Zhang X, Lan L, Chan JCP, Zhong LLD, Cheng CW, Lam WC, Tian R, Zhao C, Wu TX, Shang HC, Lyu AP, Bian ZX. Zhang X, et al. BMC Med Res Methodol. 2020 Jul 17;20(1):192. doi: 10.1186/s12874-020-01077-w. BMC Med Res Methodol. 2020. PMID: 32680474 Free PMC article.

10

Elevated extracellular matrix protein 1 in circulating extracellular vesicles supports breast cancer progression under obesity conditions.

Xu K, Fu A, Li Z, Miao L, Lou Z, Jiang K, Lau C, Su T, Tong T, Bao J, Lyu A, Kwan HY. Xu K, et al. Among authors: lyu a. Nat Commun. 2024 Feb 24;15(1):1685. doi: 10.1038/s41467-024-45995-5. Nat Commun. 2024. PMID: 38402239 Free PMC article.

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