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An End-to-End Natural Language Processing System for Automatically Extracting Radiation Therapy Events From Clinical Texts.
Bitterman DS, Goldner E, Finan S, Harris D, Durbin EB, Hochheiser H, Warner JL, Mak RH, Miller T, Savova GK. Bitterman DS, et al. Among authors: hochheiser h. Int J Radiat Oncol Biol Phys. 2023 Sep 1;117(1):262-273. doi: 10.1016/j.ijrobp.2023.03.055. Epub 2023 Mar 27. Int J Radiat Oncol Biol Phys. 2023. PMID: 36990288 Free PMC article.
An information model for computable cancer phenotypes.
Hochheiser H, Castine M, Harris D, Savova G, Jacobson RS. Hochheiser H, et al. BMC Med Inform Decis Mak. 2016 Sep 15;16(1):121. doi: 10.1186/s12911-016-0358-4. BMC Med Inform Decis Mak. 2016. PMID: 27629872 Free PMC article.
The GA4GH Phenopacket schema defines a computable representation of clinical data.
Jacobsen JOB, Baudis M, Baynam GS, Beckmann JS, Beltran S, Buske OJ, Callahan TJ, Chute CG, Courtot M, Danis D, Elemento O, Essenwanger A, Freimuth RR, Gargano MA, Groza T, Hamosh A, Harris NL, Kaliyaperumal R, Lloyd KCK, Khalifa A, Krawitz PM, Köhler S, Laraway BJ, Lehväslaiho H, Matalonga L, McMurry JA, Metke-Jimenez A, Mungall CJ, Munoz-Torres MC, Ogishima S, Papakonstantinou A, Piscia D, Pontikos N, Queralt-Rosinach N, Roos M, Sass J, Schofield PN, Seelow D, Siapos A, Smedley D, Smith LD, Steinhaus R, Sundaramurthi JC, Swietlik EM, Thun S, Vasilevsky NA, Wagner AH, Warner JL, Weiland C; GAGH Phenopacket Modeling Consortium; Haendel MA, Robinson PN. Jacobsen JOB, et al. Nat Biotechnol. 2022 Jun;40(6):817-820. doi: 10.1038/s41587-022-01357-4. Nat Biotechnol. 2022. PMID: 35705716 Free PMC article. No abstract available.
94 results