Seibt KM - Search Results

1

How to start a LINE: 5' switching rejuvenates LINE retrotransposons in tobacco and related Nicotiana species.

Hartig N, Seibt KM, Heitkam T. Hartig N, et al. Among authors: seibt km. Plant J. 2023 Jul;115(1):52-67. doi: 10.1111/tpj.16208. Epub 2023 Apr 10. Plant J. 2023. PMID: 36965091 Free article.

2

The conserved 3' Angio-domain defines a superfamily of short interspersed nuclear elements (SINEs) in higher plants.

Seibt KM, Schmidt T, Heitkam T. Seibt KM, et al. Plant J. 2020 Feb;101(3):681-699. doi: 10.1111/tpj.14567. Epub 2019 Dec 3. Plant J. 2020. PMID: 31610059 Free article.

3

Divergence of 3' ends as a driver of short interspersed nuclear element (SINE) evolution in the Salicaceae.

Kögler A, Seibt KM, Heitkam T, Morgenstern K, Reiche B, Brückner M, Wolf H, Krabel D, Schmidt T. Kögler A, et al. Among authors: seibt km. Plant J. 2020 Jul;103(1):443-458. doi: 10.1111/tpj.14721. Epub 2020 Mar 21. Plant J. 2020. PMID: 32056333 Free article.

4

The diversification and activity of hAT transposons in Musa genomes.

Menzel G, Heitkam T, Seibt KM, Nouroz F, Müller-Stoermer M, Heslop-Harrison JS, Schmidt T. Menzel G, et al. Among authors: seibt km. Chromosome Res. 2014 Dec;22(4):559-71. doi: 10.1007/s10577-014-9445-5. Epub 2014 Nov 7. Chromosome Res. 2014. PMID: 25377178

5

The Cassandra retrotransposon landscape in sugar beet (Beta vulgaris) and related Amaranthaceae: recombination and re-shuffling lead to a high structural variability.

Maiwald S, Weber B, Seibt KM, Schmidt T, Heitkam T. Maiwald S, et al. Among authors: seibt km. Ann Bot. 2021 Jan 1;127(1):91-109. doi: 10.1093/aob/mcaa176. Ann Bot. 2021. PMID: 33009553 Free PMC article.

6

FlexiDot: highly customizable, ambiguity-aware dotplots for visual sequence analyses.

Seibt KM, Schmidt T, Heitkam T. Seibt KM, et al. Bioinformatics. 2018 Oct 15;34(20):3575-3577. doi: 10.1093/bioinformatics/bty395. Bioinformatics. 2018. PMID: 29762645

7

Broken, silent, and in hiding: tamed endogenous pararetroviruses escape elimination from the genome of sugar beet (Beta vulgaris).

Schmidt N, Seibt KM, Weber B, Schwarzacher T, Schmidt T, Heitkam T. Schmidt N, et al. Among authors: seibt km. Ann Bot. 2021 Aug 26;128(3):281-299. doi: 10.1093/aob/mcab042. Ann Bot. 2021. PMID: 33729490 Free PMC article.

8

ECCsplorer: a pipeline to detect extrachromosomal circular DNA (eccDNA) from next-generation sequencing data.

Mann L, Seibt KM, Weber B, Heitkam T. Mann L, et al. Among authors: seibt km. BMC Bioinformatics. 2022 Jan 14;23(1):40. doi: 10.1186/s12859-021-04545-2. BMC Bioinformatics. 2022. PMID: 35030991 Free PMC article.

9

Diversification, evolution and methylation of short interspersed nuclear element families in sugar beet and related Amaranthaceae species.

Schwichtenberg K, Wenke T, Zakrzewski F, Seibt KM, Minoche A, Dohm JC, Weisshaar B, Himmelbauer H, Schmidt T. Schwichtenberg K, et al. Among authors: seibt km. Plant J. 2016 Jan;85(2):229-44. doi: 10.1111/tpj.13103. Plant J. 2016. PMID: 26676716 Free article.

10

Short interspersed nuclear elements (SINEs) are abundant in Solanaceae and have a family-specific impact on gene structure and genome organization.

Seibt KM, Wenke T, Muders K, Truberg B, Schmidt T. Seibt KM, et al. Plant J. 2016 May;86(3):268-85. doi: 10.1111/tpj.13170. Plant J. 2016. PMID: 26996788 Free article.

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