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Matrix and analysis metadata standards (MAMS) to facilitate harmonization and reproducibility of single-cell data.
Wang Y, Sarfraz I, Teh WK, Sokolov A, Herb BR, Creasy HH, Virshup I, Dries R, Degatano K, Mahurkar A, Schnell DJ, Madrigal P, Hilton J, Gehlenborg N, Tickle T, Campbell JD. Wang Y, et al. Among authors: hilton j. bioRxiv [Preprint]. 2023 Mar 7:2023.03.06.531314. doi: 10.1101/2023.03.06.531314. bioRxiv. 2023. Update in: Genome Biol. 2024 Aug 1;25(1):205. doi: 10.1186/s13059-024-03349-w PMID: 36945543 Free PMC article. Updated. Preprint.
MAMS: matrix and analysis metadata standards to facilitate harmonization and reproducibility of single-cell data.
Sarfraz I, Wang Y, Shastry A, Teh WK, Sokolov A, Herb BR, Creasy HH, Virshup I, Dries R, Degatano K, Mahurkar A, Schnell DJ, Madrigal P, Hilton J, Gehlenborg N, Tickle T, Campbell JD. Sarfraz I, et al. Among authors: hilton j. Genome Biol. 2024 Aug 1;25(1):205. doi: 10.1186/s13059-024-03349-w. Genome Biol. 2024. PMID: 39090672 Free PMC article.
CZ CELLxGENE Discover: a single-cell data platform for scalable exploration, analysis and modeling of aggregated data.
CZI Cell Science Program; Abdulla S, Aevermann B, Assis P, Badajoz S, Bell SM, Bezzi E, Cakir B, Chaffer J, Chambers S, Cherry JM, Chi T, Chien J, Dorman L, Garcia-Nieto P, Gloria N, Hastie M, Hegeman D, Hilton J, Huang T, Infeld A, Istrate AM, Jelic I, Katsuya K, Kim YJ, Liang K, Lin M, Lombardo M, Marshall B, Martin B, McDade F, Megill C, Patel N, Predeus A, Raymor B, Robatmili B, Rogers D, Rutherford E, Sadgat D, Shin A, Small C, Smith T, Sridharan P, Tarashansky A, Tavares N, Thomas H, Tolopko A, Urisko M, Yan J, Yeretssian G, Zamanian J, Mani A, Cool J, Carr A. CZI Cell Science Program, et al. Among authors: hilton j. Nucleic Acids Res. 2024 Nov 28:gkae1142. doi: 10.1093/nar/gkae1142. Online ahead of print. Nucleic Acids Res. 2024. PMID: 39607691
California Stress, Trauma, and Resilience Study (CalSTARS) protocol: A multiomics-based cross-sectional investigation and randomized controlled trial to elucidate the biology of ACEs and test a precision intervention for reducing stress and enhancing resilience.
Kim LY, Schüssler-Fiorenza Rose SM, Mengelkoch S, Moriarity DP, Gassen J, Alley JC, Roos LG, Jiang T, Alavi A, Thota DD, Zhang X, Perelman D, Kodish T, Krupnick JL, May M, Bowman K, Hua J, Liao YJ, Lieberman AF, Butte AJ, Lester P, Thyne SM, Hilton JF, Snyder MP, Slavich GM. Kim LY, et al. Among authors: hilton jf. Stress. 2024 Jan;27(1):2401788. doi: 10.1080/10253890.2024.2401788. Epub 2024 Dec 2. Stress. 2024. PMID: 39620249 Free article. Clinical Trial.
Guidance for Canadian Breast Cancer Practice: National Consensus Recommendations for the Systemic Treatment of Patients with HER2+ Breast Cancer in Both the Early and Metastatic Setting.
Manna M, Gelmon KA, Boileau JF, Brezden-Masley C, Cao JQ, Jerzak KJ, Prakash I, Sehdev S, Simmons C, Bouganim N, Brackstone M, Cescon DW, Chia S, Dayes IS, Edwards S, Hilton J, Joy AA, Laing K, Webster M, Henning JW. Manna M, et al. Among authors: hilton j. Curr Oncol. 2024 Oct 24;31(11):6536-6567. doi: 10.3390/curroncol31110484. Curr Oncol. 2024. PMID: 39590115 Free PMC article.
Phase transitions in random circuit sampling.
Morvan A, Villalonga B, Mi X, Mandrà S, Bengtsson A, Klimov PV, Chen Z, Hong S, Erickson C, Drozdov IK, Chau J, Laun G, Movassagh R, Asfaw A, Brandão LTAN, Peralta R, Abanin D, Acharya R, Allen R, Andersen TI, Anderson K, Ansmann M, Arute F, Arya K, Atalaya J, Bardin JC, Bilmes A, Bortoli G, Bourassa A, Bovaird J, Brill L, Broughton M, Buckley BB, Buell DA, Burger T, Burkett B, Bushnell N, Campero J, Chang HS, Chiaro B, Chik D, Chou C, Cogan J, Collins R, Conner P, Courtney W, Crook AL, Curtin B, Debroy DM, Barba ADT, Demura S, Paolo AD, Dunsworth A, Faoro L, Farhi E, Fatemi R, Ferreira VS, Burgos LF, Forati E, Fowler AG, Foxen B, Garcia G, Genois É, Giang W, Gidney C, Gilboa D, Giustina M, Gosula R, Dau AG, Gross JA, Habegger S, Hamilton MC, Hansen M, Harrigan MP, Harrington SD, Heu P, Hoffmann MR, Huang T, Huff A, Huggins WJ, Ioffe LB, Isakov SV, Iveland J, Jeffrey E, Jiang Z, Jones C, Juhas P, Kafri D, Khattar T, Khezri M, Kieferová M, Kim S, Kitaev A, Klots AR, Korotkov AN, Kostritsa F, Kreikebaum JM, Landhuis D, Laptev P, Lau KM, Laws L, Lee J, Lee KW, Lensky YD, Lester BJ, Lill AT, Liu W, Livingston WP, Locharla A, Malone FD, Martin O, Martin S, McClean JR, McEwen M, Miao KC… See abstract for full author list ➔ Morvan A, et al. Among authors: hilton j. Nature. 2024 Oct;634(8033):328-333. doi: 10.1038/s41586-024-07998-6. Epub 2024 Oct 9. Nature. 2024. PMID: 39385051 Free PMC article.
960 results