Volynsky PE - Search Results

1

The architecture of transmembrane and cytoplasmic juxtamembrane regions of Toll-like receptors.

Kornilov FD, Shabalkina AV, Lin C, Volynsky PE, Kot EF, Kayushin AL, Lushpa VA, Goncharuk MV, Arseniev AS, Goncharuk SA, Wang X, Mineev KS. Kornilov FD, et al. Among authors: volynsky pe. Nat Commun. 2023 Mar 17;14(1):1503. doi: 10.1038/s41467-023-37042-6. Nat Commun. 2023. PMID: 36932058 Free PMC article.

2

Recognizing misfolded and distorted protein structures by the assumption-based similarity score.

Golovanov AP, Volynsky PE, Ermakova SB, Arseniev AS. Golovanov AP, et al. Among authors: volynsky pe. Protein Eng. 1999 Jan;12(1):31-40. doi: 10.1093/protein/12.1.31. Protein Eng. 1999. PMID: 10065708

3

Factors important for fusogenic activity of peptides: molecular modeling study of analogs of fusion peptide of influenza virus hemagglutinin.

Efremov RG, Nolde DE, Volynsky PE, Chernyavsky AA, Dubovskii PV, Arseniev AS. Efremov RG, et al. Among authors: volynsky pe. FEBS Lett. 1999 Nov 26;462(1-2):205-10. doi: 10.1016/s0014-5793(99)01505-7. FEBS Lett. 1999. PMID: 10580120 Free article.

4

Interaction of cardiotoxins with membranes: a molecular modeling study.

Efremov RG, Volynsky PE, Nolde DE, Dubovskii PV, Arseniev AS. Efremov RG, et al. Among authors: volynsky pe. Biophys J. 2002 Jul;83(1):144-53. doi: 10.1016/S0006-3495(02)75156-4. Biophys J. 2002. PMID: 12080107 Free PMC article.

5

Monte Carlo simulations of voltage-driven translocation of a signal sequence.

Efremov RG, Volynsky PE, Nolde DE, van Dalen A, de Kruijff B, Arseniev AS. Efremov RG, et al. Among authors: volynsky pe. FEBS Lett. 2002 Aug 28;526(1-3):97-100. doi: 10.1016/s0014-5793(02)03145-9. FEBS Lett. 2002. PMID: 12208512 Free article.

6

Development of the force field parameters for phosphoimidazole and phosphohistidine.

Kosinsky YA, Volynsky PE, Lagant P, Vergoten G, Suzuki E, Arseniev AS, Efremov RG. Kosinsky YA, et al. Among authors: volynsky pe. J Comput Chem. 2004 Aug;25(11):1313-21. doi: 10.1002/jcc.20055. J Comput Chem. 2004. PMID: 15185324

7

Effect of lipid composition on the "membrane response" induced by a fusion peptide.

Volynsky PE, Polyansky AA, Simakov NA, Arseniev AS, Efremov RG. Volynsky PE, et al. Biochemistry. 2005 Nov 8;44(44):14626-37. doi: 10.1021/bi0514562. Biochemistry. 2005. PMID: 16262262

8

Association of transmembrane helices: what determines assembling of a dimer?

Efremov RG, Vereshaga YA, Volynsky PE, Nolde DE, Arseniev AS. Efremov RG, et al. Among authors: volynsky pe. J Comput Aided Mol Des. 2006 Jan;20(1):27-45. doi: 10.1007/s10822-006-9034-6. Epub 2006 May 19. J Comput Aided Mol Des. 2006. PMID: 16775778

9

Role of lipid charge in organization of water/lipid bilayer interface: insights via computer simulations.

Polyansky AA, Volynsky PE, Nolde DE, Arseniev AS, Efremov RG. Polyansky AA, et al. Among authors: volynsky pe. J Phys Chem B. 2005 Aug 11;109(31):15052-9. doi: 10.1021/jp0510185. J Phys Chem B. 2005. PMID: 16852905

10

Spatial structure and activity mechanism of a novel spider antimicrobial peptide.

Dubovskii PV, Volynsky PE, Polyansky AA, Chupin VV, Efremov RG, Arseniev AS. Dubovskii PV, et al. Among authors: volynsky pe. Biochemistry. 2006 Sep 5;45(35):10759-67. doi: 10.1021/bi060635w. Biochemistry. 2006. PMID: 16939228

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