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MicrobiotaProcess: A comprehensive R package for deep mining microbiome.
Xu S, Zhan L, Tang W, Wang Q, Dai Z, Zhou L, Feng T, Chen M, Wu T, Hu E, Yu G. Xu S, et al. Among authors: wu t. Innovation (Camb). 2023 Feb 2;4(2):100388. doi: 10.1016/j.xinn.2023.100388. eCollection 2023 Mar 13. Innovation (Camb). 2023. PMID: 36895758 Free PMC article.
ggtreeExtra: Compact Visualization of Richly Annotated Phylogenetic Data.
Xu S, Dai Z, Guo P, Fu X, Liu S, Zhou L, Tang W, Feng T, Chen M, Zhan L, Wu T, Hu E, Jiang Y, Bo X, Yu G. Xu S, et al. Among authors: wu t. Mol Biol Evol. 2021 Aug 23;38(9):4039-4042. doi: 10.1093/molbev/msab166. Mol Biol Evol. 2021. PMID: 34097064 Free PMC article.
Stemness Analysis Uncovers That The Peroxisome Proliferator-Activated Receptor Signaling Pathway Can Mediate Fatty Acid Homeostasis In Sorafenib-Resistant Hepatocellular Carcinoma Cells.
Feng T, Wu T, Zhang Y, Zhou L, Liu S, Li L, Li M, Hu E, Wang Q, Fu X, Zhan L, Xie Z, Xie W, Huang X, Shang X, Yu G. Feng T, et al. Among authors: wu t. Front Oncol. 2022 Jul 22;12:912694. doi: 10.3389/fonc.2022.912694. eCollection 2022. Front Oncol. 2022. PMID: 35957896 Free PMC article.
Exploring Epigenomic Datasets by ChIPseeker.
Wang Q, Li M, Wu T, Zhan L, Li L, Chen M, Xie W, Xie Z, Hu E, Xu S, Yu G. Wang Q, et al. Among authors: wu t. Curr Protoc. 2022 Oct;2(10):e585. doi: 10.1002/cpz1.585. Curr Protoc. 2022. PMID: 36286622
Using clusterProfiler to characterize multiomics data.
Xu S, Hu E, Cai Y, Xie Z, Luo X, Zhan L, Tang W, Wang Q, Liu B, Wang R, Xie W, Wu T, Xie L, Yu G. Xu S, et al. Among authors: wu t. Nat Protoc. 2024 Nov;19(11):3292-3320. doi: 10.1038/s41596-024-01020-z. Epub 2024 Jul 17. Nat Protoc. 2024. PMID: 39019974 Review.
20,604 results
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