Dorman KS - Search Results

1

Accurate estimation of molecular counts from amplicon sequence data with unique molecular identifiers.

Peng X, Dorman KS. Peng X, et al. Among authors: dorman ks. Bioinformatics. 2023 Jan 1;39(1):btad002. doi: 10.1093/bioinformatics/btad002. Bioinformatics. 2023. PMID: 36610988 Free PMC article.

2

cBrother: relaxing parental tree assumptions for Bayesian recombination detection.

Fang F, Ding J, Minin VN, Suchard MA, Dorman KS. Fang F, et al. Among authors: dorman ks. Bioinformatics. 2007 Feb 15;23(4):507-8. doi: 10.1093/bioinformatics/btl613. Epub 2006 Dec 4. Bioinformatics. 2007. PMID: 17145740

3

mlegp: statistical analysis for computer models of biological systems using R.

Dancik GM, Dorman KS. Dancik GM, et al. Among authors: dorman ks. Bioinformatics. 2008 Sep 1;24(17):1966-7. doi: 10.1093/bioinformatics/btn329. Epub 2008 Jul 17. Bioinformatics. 2008. PMID: 18635570 Free PMC article.

4

Reptile: representative tiling for short read error correction.

Yang X, Dorman KS, Aluru S. Yang X, et al. Among authors: dorman ks. Bioinformatics. 2010 Oct 15;26(20):2526-33. doi: 10.1093/bioinformatics/btq468. Epub 2010 Aug 16. Bioinformatics. 2010. PMID: 20834037

5

phylostratr: a framework for phylostratigraphy.

Arendsee Z, Li J, Singh U, Seetharam A, Dorman K, Wurtele ES. Arendsee Z, et al. Bioinformatics. 2019 Oct 1;35(19):3617-3627. doi: 10.1093/bioinformatics/btz171. Bioinformatics. 2019. PMID: 30873536

6

Dietary Soluble and Insoluble Fiber With or Without Enzymes Altered the Intestinal Microbiota in Weaned Pigs Challenged With Enterotoxigenic E. coli F18.

Li Q, Peng X, Burrough ER, Sahin O, Gould SA, Gabler NK, Loving CL, Dorman KS, Patience JF. Li Q, et al. Among authors: dorman ks. Front Microbiol. 2020 May 27;11:1110. doi: 10.3389/fmicb.2020.01110. eCollection 2020. Front Microbiol. 2020. PMID: 32536908 Free PMC article.

7

AmpliCI: a high-resolution model-based approach for denoising Illumina amplicon data.

Peng X, Dorman KS. Peng X, et al. Among authors: dorman ks. Bioinformatics. 2021 Jan 29;36(21):5151-5158. doi: 10.1093/bioinformatics/btaa648. Bioinformatics. 2021. PMID: 32697845 Free PMC article.

8

Coarse-graining protein structures into their dynamic communities with DCI, a dynamic community identifier.

Kumar A, Khade PM, Dorman KS, Jernigan RL. Kumar A, et al. Among authors: dorman ks. Bioinformatics. 2022 May 13;38(10):2727-2733. doi: 10.1093/bioinformatics/btac159. Bioinformatics. 2022. PMID: 35561187 Free PMC article.

9

p65 signaling dynamics drive the developmental progression of hematopoietic stem and progenitor cells through cell cycle regulation.

Campbell CA, Calderon R, Pavani G, Cheng X, Barakat R, Snella E, Liu F, Peng X, Essner JJ, Dorman KS, McGrail M, Gadue P, French DL, Espin-Palazon R. Campbell CA, et al. Among authors: dorman ks. Nat Commun. 2024 Sep 6;15(1):7787. doi: 10.1038/s41467-024-51922-5. Nat Commun. 2024. PMID: 39242546 Free PMC article.

10

Dual multiple change-point model leads to more accurate recombination detection.

Minin VN, Dorman KS, Fang F, Suchard MA. Minin VN, et al. Among authors: dorman ks. Bioinformatics. 2005 Jul 1;21(13):3034-42. doi: 10.1093/bioinformatics/bti459. Epub 2005 May 24. Bioinformatics. 2005. PMID: 15914546

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