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In-silico generation of high-dimensional immune response data in patients using a deep neural network.
Fallahzadeh R, Bidoki NH, Stelzer IA, Becker M, Marić I, Chang AL, Culos A, Phongpreecha T, Xenochristou M, De Francesco D, Espinosa C, Berson E, Verdonk F, Angst MS, Gaudilliere B, Aghaeepour N. Fallahzadeh R, et al. Among authors: aghaeepour n. Cytometry A. 2023 May;103(5):392-404. doi: 10.1002/cyto.a.24709. Epub 2022 Dec 27. Cytometry A. 2023. PMID: 36507780 Free PMC article.
A dominant-negative isoform of IKAROS expands primitive normal human hematopoietic cells.
Beer PA, Knapp DJ, Kannan N, Miller PH, Babovic S, Bulaeva E, Aghaeepour N, Rabu G, Rostamirad S, Shih K, Wei L, Eaves CJ. Beer PA, et al. Among authors: aghaeepour n. Stem Cell Reports. 2014 Nov 11;3(5):841-57. doi: 10.1016/j.stemcr.2014.09.006. Epub 2014 Oct 11. Stem Cell Reports. 2014. PMID: 25418728 Free PMC article.
Deep profiling of multitube flow cytometry data.
O'Neill K, Aghaeepour N, Parker J, Hogge D, Karsan A, Dalal B, Brinkman RR. O'Neill K, et al. Among authors: aghaeepour n. Bioinformatics. 2015 May 15;31(10):1623-31. doi: 10.1093/bioinformatics/btv008. Epub 2015 Jan 18. Bioinformatics. 2015. PMID: 25600947 Free PMC article.
Integration of lyoplate based flow cytometry and computational analysis for standardized immunological biomarker discovery.
Villanova F, Di Meglio P, Inokuma M, Aghaeepour N, Perucha E, Mollon J, Nomura L, Hernandez-Fuentes M, Cope A, Prevost AT, Heck S, Maino V, Lord G, Brinkman RR, Nestle FO. Villanova F, et al. Among authors: aghaeepour n. PLoS One. 2013 Jul 3;8(7):e65485. doi: 10.1371/journal.pone.0065485. Print 2013. PLoS One. 2013. PMID: 23843942 Free PMC article.
Deletions in the cytoplasmic domain of iRhom1 and iRhom2 promote shedding of the TNF receptor by the protease ADAM17.
Maney SK, McIlwain DR, Polz R, Pandyra AA, Sundaram B, Wolff D, Ohishi K, Maretzky T, Brooke MA, Evers A, Vasudevan AA, Aghaeepour N, Scheller J, Münk C, Häussinger D, Mak TW, Nolan GP, Kelsell DP, Blobel CP, Lang KS, Lang PA. Maney SK, et al. Among authors: aghaeepour n. Sci Signal. 2015 Nov 3;8(401):ra109. doi: 10.1126/scisignal.aac5356. Sci Signal. 2015. PMID: 26535007 Free PMC article.
Flow cytometry bioinformatics.
O'Neill K, Aghaeepour N, Spidlen J, Brinkman R. O'Neill K, et al. Among authors: aghaeepour n. PLoS Comput Biol. 2013;9(12):e1003365. doi: 10.1371/journal.pcbi.1003365. Epub 2013 Dec 5. PLoS Comput Biol. 2013. PMID: 24363631 Free PMC article.
172 results