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Single-cell profiling of healthy human kidney reveals features of sex-based transcriptional programs and tissue-specific immunity.
McEvoy CM, Murphy JM, Zhang L, Clotet-Freixas S, Mathews JA, An J, Karimzadeh M, Pouyabahar D, Su S, Zaslaver O, Röst H, Arambewela R, Liu LY, Zhang S, Lawson KA, Finelli A, Wang B, MacParland SA, Bader GD, Konvalinka A, Crome SQ. McEvoy CM, et al. Among authors: karimzadeh m. Nat Commun. 2022 Dec 10;13(1):7634. doi: 10.1038/s41467-022-35297-z. Nat Commun. 2022. PMID: 36496458 Free PMC article.
Massively multiplex single-molecule oligonucleosome footprinting.
Abdulhay NJ, McNally CP, Hsieh LJ, Kasinathan S, Keith A, Estes LS, Karimzadeh M, Underwood JG, Goodarzi H, Narlikar GJ, Ramani V. Abdulhay NJ, et al. Among authors: karimzadeh m. Elife. 2020 Dec 2;9:e59404. doi: 10.7554/eLife.59404. Elife. 2020. PMID: 33263279 Free PMC article.
Variation in genomic landscape of clear cell renal cell carcinoma across Europe.
Scelo G, Riazalhosseini Y, Greger L, Letourneau L, Gonzàlez-Porta M, Wozniak MB, Bourgey M, Harnden P, Egevad L, Jackson SM, Karimzadeh M, Arseneault M, Lepage P, How-Kit A, Daunay A, Renault V, Blanché H, Tubacher E, Sehmoun J, Viksna J, Celms E, Opmanis M, Zarins A, Vasudev NS, Seywright M, Abedi-Ardekani B, Carreira C, Selby PJ, Cartledge JJ, Byrnes G, Zavadil J, Su J, Holcatova I, Brisuda A, Zaridze D, Moukeria A, Foretova L, Navratilova M, Mates D, Jinga V, Artemov A, Nedoluzhko A, Mazur A, Rastorguev S, Boulygina E, Heath S, Gut M, Bihoreau MT, Lechner D, Foglio M, Gut IG, Skryabin K, Prokhortchouk E, Cambon-Thomsen A, Rung J, Bourque G, Brennan P, Tost J, Banks RE, Brazma A, Lathrop GM. Scelo G, et al. Among authors: karimzadeh m. Nat Commun. 2014 Oct 29;5:5135. doi: 10.1038/ncomms6135. Nat Commun. 2014. PMID: 25351205 Free article.
The molecular consequences of androgen activity in the human breast.
Raths F, Karimzadeh M, Ing N, Martinez A, Yang Y, Qu Y, Lee TY, Mulligan B, Devkota S, Tilley WT, Hickey TE, Wang B, Giuliano AE, Bose S, Goodarzi H, Ray EC, Cui X, Knott SRV. Raths F, et al. Among authors: karimzadeh m. Cell Genom. 2023 Mar 8;3(3):100272. doi: 10.1016/j.xgen.2023.100272. eCollection 2023 Mar 8. Cell Genom. 2023. PMID: 36950379 Free PMC article.
Multiscale interactome analysis coupled with off-target drug predictions reveals drug repurposing candidates for human coronavirus disease.
Sugiyama MG, Cui H, Redka DS, Karimzadeh M, Rujas E, Maan H, Hayat S, Cheung K, Misra R, McPhee JB, Viirre RD, Haller A, Botelho RJ, Karshafian R, Sabatinos SA, Fairn GD, Madani Tonekaboni SA, Windemuth A, Julien JP, Shahani V, MacKinnon SS, Wang B, Antonescu CN. Sugiyama MG, et al. Among authors: karimzadeh m. Sci Rep. 2021 Dec 2;11(1):23315. doi: 10.1038/s41598-021-02432-7. Sci Rep. 2021. PMID: 34857794 Free PMC article.
Integrative identification of non-coding regulatory regions driving metastatic prostate cancer.
Woo BJ, Moussavi-Baygi R, Karner H, Karimzadeh M, Garcia K, Joshi T, Yin K, Navickas A, Gilbert LA, Wang B, Asgharian H, Feng FY, Goodarzi H. Woo BJ, et al. Among authors: karimzadeh m. bioRxiv [Preprint]. 2023 Jun 2:2023.04.14.535921. doi: 10.1101/2023.04.14.535921. bioRxiv. 2023. Update in: Cell Rep. 2024 Sep 24;43(9):114764. doi: 10.1016/j.celrep.2024.114764 PMID: 37398273 Free PMC article. Updated. Preprint.
A General Framework for Interrogation of mRNA Stability Programs Identifies RNA-Binding Proteins that Govern Cancer Transcriptomes.
Perron G, Jandaghi P, Solanki S, Safisamghabadi M, Storoz C, Karimzadeh M, Papadakis AI, Arseneault M, Scelo G, Banks RE, Tost J, Lathrop M, Tanguay S, Brazma A, Huang S, Brimo F, Najafabadi HS, Riazalhosseini Y. Perron G, et al. Among authors: karimzadeh m. Cell Rep. 2018 May 8;23(6):1639-1650. doi: 10.1016/j.celrep.2018.04.031. Cell Rep. 2018. PMID: 29742422 Free article.
89 results