Yang X - Search Results

1

Plant MicroRNA Identification and Annotation Using Deep Sequencing Data.

Kuang Z, Zhao Y, Yang X. Kuang Z, et al. Among authors: yang x. Methods Mol Biol. 2023;2595:239-250. doi: 10.1007/978-1-0716-2823-2_17. Methods Mol Biol. 2023. PMID: 36441467

2

Identification and characterization of a subset of microRNAs in wheat (Triticum aestivum L.).

Su C, Yang X, Gao S, Tang Y, Zhao C, Li L. Su C, et al. Among authors: yang x. Genomics. 2014 Apr;103(4):298-307. doi: 10.1016/j.ygeno.2014.03.002. Epub 2014 Mar 22. Genomics. 2014. PMID: 24667243 Free article.

3

miRDeep-P2: accurate and fast analysis of the microRNA transcriptome in plants.

Kuang Z, Wang Y, Li L, Yang X. Kuang Z, et al. Among authors: yang x. Bioinformatics. 2019 Jul 15;35(14):2521-2522. doi: 10.1093/bioinformatics/bty972. Bioinformatics. 2019. PMID: 30521000

4

PmiREN: a comprehensive encyclopedia of plant miRNAs.

Guo Z, Kuang Z, Wang Y, Zhao Y, Tao Y, Cheng C, Yang J, Lu X, Hao C, Wang T, Cao X, Wei J, Li L, Yang X. Guo Z, et al. Among authors: yang x, yang j. Nucleic Acids Res. 2020 Jan 8;48(D1):D1114-D1121. doi: 10.1093/nar/gkz894. Nucleic Acids Res. 2020. PMID: 31602478 Free PMC article.

5

A Bioinformatics Pipeline to Accurately and Efficiently Analyze the MicroRNA Transcriptomes in Plants.

Wang Y, Kuang Z, Li L, Yang X. Wang Y, et al. Among authors: yang x. J Vis Exp. 2020 Jan 21;(155). doi: 10.3791/59864. J Vis Exp. 2020. PMID: 32065125

6

Selection of suitable reference genes for qRT-PCR expression analysis of Codonopsis pilosula under different experimental conditions.

Yang J, Yang X, Kuang Z, Li B, Lu X, Cao X, Kang J. Yang J, et al. Among authors: yang x. Mol Biol Rep. 2020 Jun;47(6):4169-4181. doi: 10.1007/s11033-020-05501-8. Epub 2020 May 14. Mol Biol Rep. 2020. PMID: 32410139

7

Elucidation of the MicroRNA Transcriptome in Western Corn Rootworm Reveals Its Dynamic and Evolutionary Complexity.

Yang X, Fishilevich E, German MA, Gandra P, McEwan RE, Billion A, Knorr E, Vilcinskas A, Narva KE. Yang X, et al. Genomics Proteomics Bioinformatics. 2021 Oct;19(5):800-814. doi: 10.1016/j.gpb.2019.03.008. Epub 2021 Feb 17. Genomics Proteomics Bioinformatics. 2021. PMID: 33607298 Free PMC article.

8

MicroRNA annotation in plants: current status and challenges.

Zhao Y, Kuang Z, Wang Y, Li L, Yang X. Zhao Y, et al. Among authors: yang x. Brief Bioinform. 2021 Sep 2;22(5):bbab075. doi: 10.1093/bib/bbab075. Brief Bioinform. 2021. PMID: 33754625 Review.

9

PmiREN2.0: from data annotation to functional exploration of plant microRNAs.

Guo Z, Kuang Z, Zhao Y, Deng Y, He H, Wan M, Tao Y, Wang D, Wei J, Li L, Yang X. Guo Z, et al. Among authors: yang x. Nucleic Acids Res. 2022 Jan 7;50(D1):D1475-D1482. doi: 10.1093/nar/gkab811. Nucleic Acids Res. 2022. PMID: 34554254 Free PMC article.

10

Comprehensive Annotation and Functional Exploration of MicroRNAs in Lettuce.

Deng Y, Qin Y, Yang P, Du J, Kuang Z, Zhao Y, Wang Y, Li D, Wei J, Guo X, Li L, Yang X. Deng Y, et al. Among authors: yang p, yang x. Front Plant Sci. 2021 Dec 24;12:781836. doi: 10.3389/fpls.2021.781836. eCollection 2021. Front Plant Sci. 2021. PMID: 35003165 Free PMC article.

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