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A comprehensive update to the Mycobacterium tuberculosis H37Rv reference genome.
Chitale P, Lemenze AD, Fogarty EC, Shah A, Grady C, Odom-Mabey AR, Johnson WE, Yang JH, Eren AM, Brosch R, Kumar P, Alland D. Chitale P, et al. Among authors: eren am. Nat Commun. 2022 Nov 18;13(1):7068. doi: 10.1038/s41467-022-34853-x. Nat Commun. 2022. PMID: 36400796 Free PMC article.
The Wolbachia mobilome in Culex pipiens includes a putative plasmid.
Reveillaud J, Bordenstein SR, Cruaud C, Shaiber A, Esen ÖC, Weill M, Makoundou P, Lolans K, Watson AR, Rakotoarivony I, Bordenstein SR, Eren AM. Reveillaud J, et al. Among authors: eren am. Nat Commun. 2019 Mar 5;10(1):1051. doi: 10.1038/s41467-019-08973-w. Nat Commun. 2019. PMID: 30837458 Free PMC article.
Community-led, integrated, reproducible multi-omics with anvi'o.
Eren AM, Kiefl E, Shaiber A, Veseli I, Miller SE, Schechter MS, Fink I, Pan JN, Yousef M, Fogarty EC, Trigodet F, Watson AR, Esen ÖC, Moore RM, Clayssen Q, Lee MD, Kivenson V, Graham ED, Merrill BD, Karkman A, Blankenberg D, Eppley JM, Sjödin A, Scott JJ, Vázquez-Campos X, McKay LJ, McDaniel EA, Stevens SLR, Anderson RE, Fuessel J, Fernandez-Guerra A, Maignien L, Delmont TO, Willis AD. Eren AM, et al. Nat Microbiol. 2021 Jan;6(1):3-6. doi: 10.1038/s41564-020-00834-3. Nat Microbiol. 2021. PMID: 33349678 Free PMC article.
A highly conserved and globally prevalent cryptic plasmid is among the most numerous mobile genetic elements in the human gut.
Fogarty EC, Schechter MS, Lolans K, Sheahan ML, Veseli I, Moore R, Kiefl E, Moody T, Rice PA, Yu MK, Mimee M, Chang EB, Mclellan SL, Willis AD, Comstock LE, Eren AM. Fogarty EC, et al. Among authors: eren am. bioRxiv [Preprint]. 2023 Mar 25:2023.03.25.534219. doi: 10.1101/2023.03.25.534219. bioRxiv. 2023. Update in: Cell. 2024 Feb 29;187(5):1206-1222.e16. doi: 10.1016/j.cell.2024.01.039 PMID: 36993556 Free PMC article. Updated. Preprint.
107 results