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Page 1
The 3D enhancer network of the developing T cell genome is shaped by SATB1.
Zelenka T, Klonizakis A, Tsoukatou D, Papamatheakis DA, Franzenburg S, Tzerpos P, Tzonevrakis IR, Papadogkonas G, Kapsetaki M, Nikolaou C, Plewczynski D, Spilianakis C. Zelenka T, et al. Among authors: klonizakis a. Nat Commun. 2022 Nov 14;13(1):6954. doi: 10.1038/s41467-022-34345-y. Nat Commun. 2022. PMID: 36376298 Free PMC article.
CEBPA phase separation links transcriptional activity and 3D chromatin hubs.
Christou-Kent M, Cuartero S, Garcia-Cabau C, Ruehle J, Naderi J, Erber J, Neguembor MV, Plana-Carmona M, Alcoverro-Bertran M, De Andres-Aguayo L, Klonizakis A, Julià-Vilella E, Lynch C, Serrano M, Hnisz D, Salvatella X, Graf T, Stik G. Christou-Kent M, et al. Among authors: klonizakis a. Cell Rep. 2023 Aug 29;42(8):112897. doi: 10.1016/j.celrep.2023.112897. Epub 2023 Jul 29. Cell Rep. 2023. PMID: 37516962 Free article.
Carm1-arginine methylation of the transcription factor C/EBPα regulates transdifferentiation velocity.
Torcal Garcia G, Kowenz-Leutz E, Tian TV, Klonizakis A, Lerner J, De Andres-Aguayo L, Sapozhnikova V, Berenguer C, Carmona MP, Casadesus MV, Bulteau R, Francesconi M, Peiro S, Mertins P, Zaret K, Leutz A, Graf T. Torcal Garcia G, et al. Among authors: klonizakis a. Elife. 2023 Jun 27;12:e83951. doi: 10.7554/eLife.83951. Elife. 2023. PMID: 37365888 Free PMC article.
The trophectoderm acts as a niche for the inner cell mass through C/EBPα-regulated IL-6 signaling.
Plana-Carmona M, Stik G, Bulteau R, Segura-Morales C, Alcázar N, Wyatt CDR, Klonizakis A, de Andrés-Aguayo L, Gasnier M, Tian TV, Torcal Garcia G, Vila-Casadesús M, Plachta N, Serrano M, Francesconi M, Graf T. Plana-Carmona M, et al. Among authors: klonizakis a. Stem Cell Reports. 2022 Sep 13;17(9):1991-2004. doi: 10.1016/j.stemcr.2022.07.009. Epub 2022 Aug 11. Stem Cell Reports. 2022. PMID: 35961310 Free PMC article.