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City-wide wastewater genomic surveillance through the successive emergence of SARS-CoV-2 Alpha and Delta variants.
Brunner FS, Brown MR, Bassano I, Denise H, Khalifa MS, Wade MJ, van Aerle R, Kevill JL, Jones DL, Farkas K, Jeffries AR; COVID-19 Genomics UK (COG-UK) Consortium; Cairns E, Wierzbicki C, Paterson S. Brunner FS, et al. Among authors: van aerle r. Water Res. 2022 Nov 1;226:119306. doi: 10.1016/j.watres.2022.119306. Epub 2022 Oct 28. Water Res. 2022. PMID: 36369689 Free PMC article.
Evaluation of variant calling algorithms for wastewater-based epidemiology using mixed populations of SARS-CoV-2 variants in synthetic and wastewater samples.
Bassano I, Ramachandran VK, Khalifa MS, Lilley CJ, Brown MR, van Aerle R, Denise H, Rowe W, George A, Cairns E, Wierzbicki C, Pickwell ND, Carlile M, Holmes N, Payne A, Loose M, Burke TA, Paterson S, Wade MJ, Grimsley JMS. Bassano I, et al. Among authors: van aerle r. Microb Genom. 2023 Apr;9(4):mgen000933. doi: 10.1099/mgen.0.000933. Microb Genom. 2023. PMID: 37074153 Free PMC article.
Erratum for Child et al., "Comparison of metagenomic and targeted methods for sequencing human pathogenic viruses from wastewater".
Child HT, Airey G, Maloney DM, Parker A, Wild J, McGinley S, Evens N, Porter J, Templeton K, Paterson S, van Aerle R, Wade MJ, Jeffries AR, Bassano I. Child HT, et al. Among authors: van aerle r. mBio. 2024 Oct 16;15(10):e0255824. doi: 10.1128/mbio.02558-24. Epub 2024 Aug 30. mBio. 2024. PMID: 39212408 Free PMC article. No abstract available.
The Genomic Signature and Transcriptional Response of Metal Tolerance in Brown Trout Inhabiting Metal-Polluted Rivers.
Paris JR, King RA, Ferrer Obiol J, Shaw S, Lange A, Bourret V, Hamilton PB, Rowe D, Laing LV, Farbos A, Moore K, Urbina MA, van Aerle R, Catchen JM, Wilson RW, Bury NR, Santos EM, Stevens JR. Paris JR, et al. Among authors: van aerle r. Mol Ecol. 2025 Jan;34(1):e17591. doi: 10.1111/mec.17591. Epub 2024 Nov 19. Mol Ecol. 2025. PMID: 39558756 Free PMC article.
71 results