Koide A - Search Results

1

Inhibition of RAS-driven signaling and tumorigenesis with a pan-RAS monobody targeting the Switch I/II pocket.

Wallon L, Khan I, Teng KW, Koide A, Zuberi M, Li J, Ketavarapu G, Traaseth NJ, O'Bryan JP, Koide S. Wallon L, et al. Among authors: koide s, koide a. Proc Natl Acad Sci U S A. 2022 Oct 25;119(43):e2204481119. doi: 10.1073/pnas.2204481119. Epub 2022 Oct 17. Proc Natl Acad Sci U S A. 2022. PMID: 36252024 Free PMC article.

2

A stable single-layer beta-sheet without a hydrophobic core.

Pham TN, Koide A, Koide S. Pham TN, et al. Among authors: koide s, koide a. Nat Struct Biol. 1998 Feb;5(2):115-9. doi: 10.1038/nsb0298-115. Nat Struct Biol. 1998. PMID: 9461076

3

The fibronectin type III domain as a scaffold for novel binding proteins.

Koide A, Bailey CW, Huang X, Koide S. Koide A, et al. Among authors: koide s. J Mol Biol. 1998 Dec 11;284(4):1141-51. doi: 10.1006/jmbi.1998.2238. J Mol Biol. 1998. PMID: 9837732 Free article.

4

Solution conformation and amyloid-like fibril formation of a polar peptide derived from a beta-hairpin in the OspA single-layer beta-sheet.

Ohnishi S, Koide A, Koide S. Ohnishi S, et al. Among authors: koide s, koide a. J Mol Biol. 2000 Aug 11;301(2):477-89. doi: 10.1006/jmbi.2000.3980. J Mol Biol. 2000. PMID: 10926522 Free article.

5

The roles of turn formation and cross-strand interactions in fibrillization of peptides derived from the OspA single-layer beta-sheet.

Ohnishi S, Koide A, Koide S. Ohnishi S, et al. Among authors: koide s, koide a. Protein Sci. 2001 Oct;10(10):2083-92. doi: 10.1110/ps.15901. Protein Sci. 2001. PMID: 11567099 Free PMC article.

6

Probing protein conformational changes in living cells by using designer binding proteins: application to the estrogen receptor.

Koide A, Abbatiello S, Rothgery L, Koide S. Koide A, et al. Among authors: koide s. Proc Natl Acad Sci U S A. 2002 Feb 5;99(3):1253-8. doi: 10.1073/pnas.032665299. Epub 2002 Jan 29. Proc Natl Acad Sci U S A. 2002. PMID: 11818562 Free PMC article.

7

Exploring the potential of the monobody scaffold: effects of loop elongation on the stability of a fibronectin type III domain.

Batori V, Koide A, Koide S. Batori V, et al. Among authors: koide s, koide a. Protein Eng. 2002 Dec;15(12):1015-20. doi: 10.1093/protein/15.12.1015. Protein Eng. 2002. PMID: 12601141

8

Conformational heterogeneity of an equilibrium folding intermediate quantified and mapped by scanning mutagenesis.

Yan S, Gawlak G, Smith J, Silver L, Koide A, Koide S. Yan S, et al. Among authors: koide s, koide a. J Mol Biol. 2004 May 7;338(4):811-25. doi: 10.1016/j.jmb.2004.02.063. J Mol Biol. 2004. PMID: 15099747

9

High-affinity fragment complementation of a fibronectin type III domain and its application to stability enhancement.

Dutta S, Batori V, Koide A, Koide S. Dutta S, et al. Among authors: koide s, koide a. Protein Sci. 2005 Nov;14(11):2838-48. doi: 10.1110/ps.051603005. Epub 2005 Sep 30. Protein Sci. 2005. PMID: 16199661 Free PMC article.

10

Conformation-specific affinity purification of proteins using engineered binding proteins: application to the estrogen receptor.

Huang J, Koide A, Nettle KW, Greene GL, Koide S. Huang J, et al. Among authors: koide s, koide a. Protein Expr Purif. 2006 Jun;47(2):348-54. doi: 10.1016/j.pep.2005.10.021. Epub 2005 Nov 14. Protein Expr Purif. 2006. PMID: 16325424

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