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Repression and 3D-restructuring resolves regulatory conflicts in evolutionarily rearranged genomes.
Cell. 2022 Sep 29;185(20):3689-3704.e21. doi: 10.1016/j.cell.2022.09.006.
Cell. 2022.
PMID: 36179666
Free PMC article.
Integration of Hi-C with short and long-read genome sequencing reveals the structure of germline rearranged genomes.
Schöpflin R, Melo US, Moeinzadeh H, Heller D, Laupert V, Hertzberg J, Holtgrewe M, Alavi N, Klever MK, Jungnitsch J, Comak E, Türkmen S, Horn D, Duffourd Y, Faivre L, Callier P, Sanlaville D, Zuffardi O, Tenconi R, Kurtas NE, Giglio S, Prager B, Latos-Bielenska A, Vogel I, Bugge M, Tommerup N, Spielmann M, Vitobello A, Kalscheuer VM, Vingron M, Mundlos S.
Schöpflin R, et al. Among authors: laupert v.
Nat Commun. 2022 Oct 29;13(1):6470. doi: 10.1038/s41467-022-34053-7.
Nat Commun. 2022.
PMID: 36309531
Free PMC article.
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CENTRE: a gradient boosting algorithm for Cell-type-specific ENhancer-Target pREdiction.
Rapakoulia T, Lopez Ruiz De Vargas S, Omgba PA, Laupert V, Ulitsky I, Vingron M.
Rapakoulia T, et al. Among authors: laupert v.
Bioinformatics. 2023 Nov 1;39(11):btad687. doi: 10.1093/bioinformatics/btad687.
Bioinformatics. 2023.
PMID: 37982748
Free PMC article.
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