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Whole-genome sequence and assembly of the Javan gibbon (Hylobates moloch).
Escalona M, VanCampen J, Maurer NW, Haukness M, Okhovat M, Harris RS, Watwood A, Hartley GA, O'Neill RJ, Medvedev P, Makova KD, Vollmers C, Carbone L, Green RE. Escalona M, et al. Among authors: green re. J Hered. 2023 Mar 16;114(1):35-43. doi: 10.1093/jhered/esac043. J Hered. 2023. PMID: 36146896 Free PMC article.
Minimizing polymerase biases in metabarcoding.
Nichols RV, Vollmers C, Newsom LA, Wang Y, Heintzman PD, Leighton M, Green RE, Shapiro B. Nichols RV, et al. Among authors: green re. Mol Ecol Resour. 2018 May 24. doi: 10.1111/1755-0998.12895. Online ahead of print. Mol Ecol Resour. 2018. PMID: 29797549
Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes.
Shafin K, Pesout T, Lorig-Roach R, Haukness M, Olsen HE, Bosworth C, Armstrong J, Tigyi K, Maurer N, Koren S, Sedlazeck FJ, Marschall T, Mayes S, Costa V, Zook JM, Liu KJ, Kilburn D, Sorensen M, Munson KM, Vollger MR, Monlong J, Garrison E, Eichler EE, Salama S, Haussler D, Green RE, Akeson M, Phillippy A, Miga KH, Carnevali P, Jain M, Paten B. Shafin K, et al. Among authors: green re. Nat Biotechnol. 2020 Sep;38(9):1044-1053. doi: 10.1038/s41587-020-0503-6. Epub 2020 May 4. Nat Biotechnol. 2020. PMID: 32686750 Free PMC article.
Sequence diversity analyses of an improved rhesus macaque genome enhance its biomedical utility.
Warren WC, Harris RA, Haukness M, Fiddes IT, Murali SC, Fernandes J, Dishuck PC, Storer JM, Raveendran M, Hillier LW, Porubsky D, Mao Y, Gordon D, Vollger MR, Lewis AP, Munson KM, DeVogelaere E, Armstrong J, Diekhans M, Walker JA, Tomlinson C, Graves-Lindsay TA, Kremitzki M, Salama SR, Audano PA, Escalona M, Maurer NW, Antonacci F, Mercuri L, Maggiolini FAM, Catacchio CR, Underwood JG, O'Connor DH, Sanders AD, Korbel JO, Ferguson B, Kubisch HM, Picker L, Kalin NH, Rosene D, Levine J, Abbott DH, Gray SB, Sanchez MM, Kovacs-Balint ZA, Kemnitz JW, Thomasy SM, Roberts JA, Kinnally EL, Capitanio JP, Skene JHP, Platt M, Cole SA, Green RE, Ventura M, Wiseman RW, Paten B, Batzer MA, Rogers J, Eichler EE. Warren WC, et al. Among authors: green re. Science. 2020 Dec 18;370(6523):eabc6617. doi: 10.1126/science.abc6617. Science. 2020. PMID: 33335035 Free PMC article.
A Reference Genome Assembly of Simmental Cattle, Bos taurus taurus.
Heaton MP, Smith TPL, Bickhart DM, Vander Ley BL, Kuehn LA, Oppenheimer J, Shafer WR, Schuetze FT, Stroud B, McClure JC, Barfield JP, Blackburn HD, Kalbfleisch TS, Davenport KM, Kuhn KL, Green RE, Shapiro B, Rosen BD. Heaton MP, et al. Among authors: green re. J Hered. 2021 Mar 29;112(2):184-191. doi: 10.1093/jhered/esab002. J Hered. 2021. PMID: 33438035 Free PMC article.
A Reference Genome Assembly of American Bison, Bison bison bison.
Oppenheimer J, Rosen BD, Heaton MP, Vander Ley BL, Shafer WR, Schuetze FT, Stroud B, Kuehn LA, McClure JC, Barfield JP, Blackburn HD, Kalbfleisch TS, Bickhart DM, Davenport KM, Kuhn KL, Green RE, Shapiro B, Smith TPL. Oppenheimer J, et al. Among authors: green re. J Hered. 2021 Mar 29;112(2):174-183. doi: 10.1093/jhered/esab003. J Hered. 2021. PMID: 33595645 Free PMC article.
318 results