Qi Q - Search Results

1

Genomics and epigenetics guided identification of tissue-specific genomic safe harbors.

Shrestha D, Bag A, Wu R, Zhang Y, Tang X, Qi Q, Xing J, Cheng Y. Shrestha D, et al. Among authors: qi q. Genome Biol. 2022 Sep 21;23(1):199. doi: 10.1186/s13059-022-02770-3. Genome Biol. 2022. PMID: 36131352 Free PMC article.

2

Metabolic switching in pluripotent stem cells reorganizes energy metabolism and subcellular organelles.

O'Reilly C, Cho JH, Qi Q, Peters JL, Fukuda Y, Frase S, Peng J, Schuetz JD, Cheng Y, Yoon SO, Han MJ. O'Reilly C, et al. Among authors: qi q. Exp Cell Res. 2019 Jun 1;379(1):55-64. doi: 10.1016/j.yexcr.2019.03.028. Epub 2019 Mar 25. Exp Cell Res. 2019. PMID: 30922922 Free PMC article.

3

Corrigendum to "Metabolic switching in pluripotent stem cells reorganizes energy metabolism and subcellular organelles" [379 (2019) 55-64].

O'Reilly C, Cho JH, Qi Q, Peters JL, Fukuda Y, Frase S, Peng J, Schuetz JD, Cheng Y, Yoon SO, Han MJ. O'Reilly C, et al. Among authors: qi q. Exp Cell Res. 2019 Aug 1;381(1):163. doi: 10.1016/j.yexcr.2019.05.002. Epub 2019 May 9. Exp Cell Res. 2019. PMID: 31079852 No abstract available.

4

The primitive growth factor NME7_AB induces mitochondrially active naïve-like pluripotent stem cells.

O'Reilly C, Qi Q, Peters JL, Cheng Y, Yoon SO, Han MJ. O'Reilly C, et al. Among authors: qi q. Biochem Biophys Rep. 2019 Aug 20;20:100656. doi: 10.1016/j.bbrep.2019.100656. eCollection 2019 Dec. Biochem Biophys Rep. 2019. PMID: 31467990 Free PMC article.

5

CHANGE-seq reveals genetic and epigenetic effects on CRISPR-Cas9 genome-wide activity.

Lazzarotto CR, Malinin NL, Li Y, Zhang R, Yang Y, Lee G, Cowley E, He Y, Lan X, Jividen K, Katta V, Kolmakova NG, Petersen CT, Qi Q, Strelcov E, Maragh S, Krenciute G, Ma J, Cheng Y, Tsai SQ. Lazzarotto CR, et al. Among authors: qi q. Nat Biotechnol. 2020 Nov;38(11):1317-1327. doi: 10.1038/s41587-020-0555-7. Epub 2020 Jun 15. Nat Biotechnol. 2020. PMID: 32541958 Free PMC article.

6

Dynamic CTCF binding directly mediates interactions among cis-regulatory elements essential for hematopoiesis.

Qi Q, Cheng L, Tang X, He Y, Li Y, Yee T, Shrestha D, Feng R, Xu P, Zhou X, Pruett-Miller S, Hardison RC, Weiss MJ, Cheng Y. Qi Q, et al. Blood. 2021 Mar 11;137(10):1327-1339. doi: 10.1182/blood.2020005780. Blood. 2021. PMID: 33512425 Free PMC article.

7

Single-nucleotide-level mapping of DNA regulatory elements that control fetal hemoglobin expression.

Cheng L, Li Y, Qi Q, Xu P, Feng R, Palmer L, Chen J, Wu R, Yee T, Zhang J, Yao Y, Sharma A, Hardison RC, Weiss MJ, Cheng Y. Cheng L, et al. Among authors: qi q. Nat Genet. 2021 Jun;53(6):869-880. doi: 10.1038/s41588-021-00861-8. Epub 2021 May 6. Nat Genet. 2021. PMID: 33958780 Free PMC article.

8

Impairment of human terminal erythroid differentiation by histone deacetylase 5 deficiency.

Wang Y, Li W, Schulz VP, Zhao H, Qu X, Qi Q, Cheng Y, Guo X, Zhang S, Wei X, Liu D, Yazdanbakhsh K, Hillyer CD, Mohandas N, Chen L, Gallagher PG, An X. Wang Y, et al. Among authors: qi q. Blood. 2021 Oct 28;138(17):1615-1627. doi: 10.1182/blood.2020007401. Blood. 2021. PMID: 34036344 Free PMC article.

9

An NFIX-mediated regulatory network governs the balance of hematopoietic stem and progenitor cells during hematopoiesis.

Walker M, Li Y, Morales-Hernandez A, Qi Q, Parupalli C, Brown S, Christian C, Clements WK, Cheng Y, McKinney-Freeman S. Walker M, et al. Among authors: qi q. Blood Adv. 2023 Sep 12;7(17):4677-4689. doi: 10.1182/bloodadvances.2022007811. Blood Adv. 2023. PMID: 36478187 Free PMC article.

10

Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes.

Xiang G, He X, Giardine BM, Isaac KJ, Taylor DJ, McCoy RC, Jansen C, Keller CA, Wixom AQ, Cockburn A, Miller A, Qi Q, He Y, Li Y, Lichtenberg J, Heuston EF, Anderson SM, Luan J, Vermunt MW, Yue F, Sauria MEG, Schatz MC, Taylor J, Gottgens B, Hughes JR, Higgs DR, Weiss MJ, Cheng Y, Blobel GA, Bodine DM, Zhang Y, Li Q, Mahony S, Hardison RC. Xiang G, et al. Among authors: qi q. bioRxiv [Preprint]. 2024 May 17:2023.04.02.535219. doi: 10.1101/2023.04.02.535219. bioRxiv. 2024. Update in: Genome Res. 2024 Aug 20;34(7):1089-1105. doi: 10.1101/gr.277950.123 PMID: 37066352 Free PMC article. Updated. Preprint.

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