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Page 1
Open and reproducible neuroimaging: From study inception to publication.
Niso G, Botvinik-Nezer R, Appelhoff S, De La Vega A, Esteban O, Etzel JA, Finc K, Ganz M, Gau R, Halchenko YO, Herholz P, Karakuzu A, Keator DB, Markiewicz CJ, Maumet C, Pernet CR, Pestilli F, Queder N, Schmitt T, Sójka W, Wagner AS, Whitaker KJ, Rieger JW. Niso G, et al. Among authors: appelhoff s. Neuroimage. 2022 Nov;263:119623. doi: 10.1016/j.neuroimage.2022.119623. Epub 2022 Sep 12. Neuroimage. 2022. PMID: 36100172 Free PMC article. Review.
PyBIDS: Python tools for BIDS datasets.
Yarkoni T, Markiewicz CJ, de la Vega A, Gorgolewski KJ, Salo T, Halchenko YO, McNamara Q, DeStasio K, Poline JB, Petrov D, Hayot-Sasson V, Nielson DM, Carlin J, Kiar G, Whitaker K, DuPre E, Wagner A, Tirrell LS, Jas M, Hanke M, Poldrack RA, Esteban O, Appelhoff S, Holdgraf C, Staden I, Thirion B, Kleinschmidt DF, Lee JA, Visconti di Oleggio Castello M, Notter MP, Blair R. Yarkoni T, et al. Among authors: appelhoff s. J Open Source Softw. 2019;4(40):1294. doi: 10.21105/joss.01294. Epub 2019 Aug 12. J Open Source Softw. 2019. PMID: 32775955 Free PMC article. No abstract available.
#EEGManyLabs: Investigating the replicability of influential EEG experiments.
Pavlov YG, Adamian N, Appelhoff S, Arvaneh M, Benwell CSY, Beste C, Bland AR, Bradford DE, Bublatzky F, Busch NA, Clayson PE, Cruse D, Czeszumski A, Dreber A, Dumas G, Ehinger B, Ganis G, He X, Hinojosa JA, Huber-Huber C, Inzlicht M, Jack BN, Johannesson M, Jones R, Kalenkovich E, Kaltwasser L, Karimi-Rouzbahani H, Keil A, König P, Kouara L, Kulke L, Ladouceur CD, Langer N, Liesefeld HR, Luque D, MacNamara A, Mudrik L, Muthuraman M, Neal LB, Nilsonne G, Niso G, Ocklenburg S, Oostenveld R, Pernet CR, Pourtois G, Ruzzoli M, Sass SM, Schaefer A, Senderecka M, Snyder JS, Tamnes CK, Tognoli E, van Vugt MK, Verona E, Vloeberghs R, Welke D, Wessel JR, Zakharov I, Mushtaq F. Pavlov YG, et al. Among authors: appelhoff s. Cortex. 2021 Nov;144:213-229. doi: 10.1016/j.cortex.2021.03.013. Epub 2021 Apr 2. Cortex. 2021. PMID: 33965167 Free article.
Centering inclusivity in the design of online conferences-An OHBM-Open Science perspective.
Levitis E, van Praag CDG, Gau R, Heunis S, DuPre E, Kiar G, Bottenhorn KL, Glatard T, Nikolaidis A, Whitaker KJ, Mancini M, Niso G, Afyouni S, Alonso-Ortiz E, Appelhoff S, Arnatkeviciute A, Atay SM, Auer T, Baracchini G, Bayer JMM, Beauvais MJS, Bijsterbosch JD, Bilgin IP, Bollmann S, Bollmann S, Botvinik-Nezer R, Bright MG, Calhoun VD, Chen X, Chopra S, Chuan-Peng H, Close TG, Cookson SL, Craddock RC, De La Vega A, De Leener B, Demeter DV, Di Maio P, Dickie EW, Eickhoff SB, Esteban O, Finc K, Frigo M, Ganesan S, Ganz M, Garner KG, Garza-Villarreal EA, Gonzalez-Escamilla G, Goswami R, Griffiths JD, Grootswagers T, Guay S, Guest O, Handwerker DA, Herholz P, Heuer K, Huijser DC, Iacovella V, Joseph MJE, Karakuzu A, Keator DB, Kobeleva X, Kumar M, Laird AR, Larson-Prior LJ, Lautarescu A, Lazari A, Legarreta JH, Li XY, Lv J, Mansour L S, Meunier D, Moraczewski D, Nandi T, Nastase SA, Nau M, Noble S, Norgaard M, Obungoloch J, Oostenveld R, Orchard ER, Pinho AL, Poldrack RA, Qiu A, Raamana PR, Rokem A, Rutherford S, Sharan M, Shaw TB, Syeda WT, Testerman MM, Toro R, Valk SL, Van Den Bossche S, Varoquaux G, Váša F, Veldsman M, Vohryzek J, Wagner AS, Walsh RJ, White T, Wong FT, Xie… See abstract for full author list ➔ Levitis E, et al. Among authors: appelhoff s. Gigascience. 2021 Aug 20;10(8):giab051. doi: 10.1093/gigascience/giab051. Gigascience. 2021. PMID: 34414422 Free PMC article.
PET-BIDS, an extension to the brain imaging data structure for positron emission tomography.
Norgaard M, Matheson GJ, Hansen HD, Thomas A, Searle G, Rizzo G, Veronese M, Giacomel A, Yaqub M, Tonietto M, Funck T, Gillman A, Boniface H, Routier A, Dalenberg JR, Betthauser T, Feingold F, Markiewicz CJ, Gorgolewski KJ, Blair RW, Appelhoff S, Gau R, Salo T, Niso G, Pernet C, Phillips C, Oostenveld R, Gallezot JD, Carson RE, Knudsen GM, Innis RB, Ganz M. Norgaard M, et al. Among authors: appelhoff s. Sci Data. 2022 Mar 2;9(1):65. doi: 10.1038/s41597-022-01164-1. Sci Data. 2022. PMID: 35236846 Free PMC article.
Microscopy-BIDS: An Extension to the Brain Imaging Data Structure for Microscopy Data.
Bourget MH, Kamentsky L, Ghosh SS, Mazzamuto G, Lazari A, Markiewicz CJ, Oostenveld R, Niso G, Halchenko YO, Lipp I, Takerkart S, Toussaint PJ, Khan AR, Nilsonne G, Castelli FM; BIDS Maintainers; Cohen-Adad J. Bourget MH, et al. Front Neurosci. 2022 Apr 19;16:871228. doi: 10.3389/fnins.2022.871228. eCollection 2022. Front Neurosci. 2022. PMID: 35516811 Free PMC article.
ASL-BIDS, the brain imaging data structure extension for arterial spin labeling.
Clement P, Castellaro M, Okell TW, Thomas DL, Vandemaele P, Elgayar S, Oliver-Taylor A, Kirk T, Woods JG, Vos SB, Kuijer JPA, Achten E, van Osch MJP; BIDS maintainers; Detre JA, Lu H, Alsop DC, Chappell MA, Hernandez-Garcia L, Petr J, Mutsaerts HJMM. Clement P, et al. Sci Data. 2022 Sep 6;9(1):543. doi: 10.1038/s41597-022-01615-9. Sci Data. 2022. PMID: 36068231 Free PMC article.
22 results