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Computational Pipeline for Reference-Free Comparative Analysis of RNA 3D Structures Applied to SARS-CoV-2 UTR Models.
Gumna J, Antczak M, Adamiak RW, Bujnicki JM, Chen SJ, Ding F, Ghosh P, Li J, Mukherjee S, Nithin C, Pachulska-Wieczorek K, Ponce-Salvatierra A, Popenda M, Sarzynska J, Wirecki T, Zhang D, Zhang S, Zok T, Westhof E, Miao Z, Szachniuk M, Rybarczyk A. Gumna J, et al. Among authors: rybarczyk a. Int J Mol Sci. 2022 Aug 25;23(17):9630. doi: 10.3390/ijms23179630. Int J Mol Sci. 2022. PMID: 36077037 Free PMC article.
2D-PAGE as an effective method of RNA degradome analysis.
Nowacka M, Jackowiak P, Rybarczyk A, Magacz T, Strozycki PM, Barciszewski J, Figlerowicz M. Nowacka M, et al. Among authors: rybarczyk a. Mol Biol Rep. 2012 Jan;39(1):139-46. doi: 10.1007/s11033-011-0718-1. Epub 2011 May 11. Mol Biol Rep. 2012. PMID: 21559842 Free PMC article.
Sorting signal targeting mRNA into hepatic extracellular vesicles.
Szostak N, Royo F, Rybarczyk A, Szachniuk M, Blazewicz J, del Sol A, Falcon-Perez JM. Szostak N, et al. Among authors: rybarczyk a. RNA Biol. 2014;11(7):836-44. doi: 10.4161/rna.29305. Epub 2014 Jun 12. RNA Biol. 2014. PMID: 24921245 Free PMC article.
AmiRNA Designer - new method of artificial miRNA design.
Mickiewicz A, Rybarczyk A, Sarzynska J, Figlerowicz M, Blazewicz J. Mickiewicz A, et al. Among authors: rybarczyk a. Acta Biochim Pol. 2016;63(1):71-77. doi: 10.18388/abp.2015_989. Epub 2016 Jan 19. Acta Biochim Pol. 2016. PMID: 26784022 Free article.
55 results