Kaplan CD - Search Results

1

Systematic mutagenesis of TFIIH subunit p52/Tfb2 identifies residues required for XPB/Ssl2 subunit function and genetic interactions with TFB6.

Bassett J, Rimel JK, Basu S, Basnet P, Luo J, Engel KL, Nagel M, Woyciehowsky A, Ebmeier CC, Kaplan CD, Taatjes DJ, Ranish JA. Bassett J, et al. Among authors: kaplan cd. J Biol Chem. 2022 Oct;298(10):102433. doi: 10.1016/j.jbc.2022.102433. Epub 2022 Aug 28. J Biol Chem. 2022. PMID: 36041630 Free PMC article.

2

Divergent contributions of conserved active site residues to transcription by eukaryotic RNA polymerases I and II.

Viktorovskaya OV, Engel KL, French SL, Cui P, Vandeventer PJ, Pavlovic EM, Beyer AL, Kaplan CD, Schneider DA. Viktorovskaya OV, et al. Among authors: kaplan cd. Cell Rep. 2013 Sep 12;4(5):974-84. doi: 10.1016/j.celrep.2013.07.044. Epub 2013 Aug 29. Cell Rep. 2013. PMID: 23994471 Free PMC article.

3

Cryo-EM structure of TFIIH/Rad4-Rad23-Rad33 in damaged DNA opening in nucleotide excision repair.

van Eeuwen T, Shim Y, Kim HJ, Zhao T, Basu S, Garcia BA, Kaplan CD, Min JH, Murakami K. van Eeuwen T, et al. Among authors: kaplan cd. Nat Commun. 2021 Jun 7;12(1):3338. doi: 10.1038/s41467-021-23684-x. Nat Commun. 2021. PMID: 34099686 Free PMC article.

4

Ssl2/TFIIH function in transcription start site scanning by RNA polymerase II in Saccharomyces cerevisiae.

Zhao T, Vvedenskaya IO, Lai WK, Basu S, Pugh BF, Nickels BE, Kaplan CD. Zhao T, et al. Among authors: kaplan cd. Elife. 2021 Oct 15;10:e71013. doi: 10.7554/eLife.71013. Elife. 2021. PMID: 34652274 Free PMC article.

5

Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.

Yang C, Fujiwara R, Kim HJ, Basnet P, Zhu Y, Gorbea Colón JJ, Steimle S, Garcia BA, Kaplan CD, Murakami K. Yang C, et al. Among authors: kaplan cd. Mol Cell. 2022 Feb 3;82(3):660-676.e9. doi: 10.1016/j.molcel.2021.12.020. Epub 2022 Jan 19. Mol Cell. 2022. PMID: 35051353 Free PMC article.

6

Transcription start site scanning requires the fungi-specific hydrophobic loop of Tfb3.

Yang C, Basnet P, Sharmin S, Shen H, Kaplan CD, Murakami K. Yang C, et al. Among authors: kaplan cd. Nucleic Acids Res. 2024 Oct 28;52(19):11602-11611. doi: 10.1093/nar/gkae805. Nucleic Acids Res. 2024. PMID: 39287137 Free PMC article.

7

A dual interface determines the recognition of RNA polymerase II by RNA capping enzyme.

Suh MH, Meyer PA, Gu M, Ye P, Zhang M, Kaplan CD, Lima CD, Fu J. Suh MH, et al. Among authors: kaplan cd. J Biol Chem. 2010 Oct 29;285(44):34027-38. doi: 10.1074/jbc.M110.145110. Epub 2010 Aug 18. J Biol Chem. 2010. PMID: 20720002 Free PMC article.

8

RNA Polymerase II Trigger Loop Mobility: INDIRECT EFFECTS OF Rpb9.

Kaster BC, Knippa KC, Kaplan CD, Peterson DO. Kaster BC, et al. Among authors: kaplan cd. J Biol Chem. 2016 Jul 8;291(28):14883-95. doi: 10.1074/jbc.M116.714394. Epub 2016 May 18. J Biol Chem. 2016. PMID: 27226557 Free PMC article.

9

A genome-wide copper-sensitized screen identifies novel regulators of mitochondrial cytochrome c oxidase activity.

Garza NM, Griffin AT, Zulkifli M, Qiu C, Kaplan CD, Gohil VM. Garza NM, et al. Among authors: kaplan cd. J Biol Chem. 2021 Jan-Jun;296:100485. doi: 10.1016/j.jbc.2021.100485. Epub 2021 Mar 1. J Biol Chem. 2021. PMID: 33662401 Free PMC article.

10

Mediator and Pol II go to eleven (CTD repeats).

Kaplan CD. Kaplan CD. Proc Natl Acad Sci U S A. 2023 May 2;120(18):e2304596120. doi: 10.1073/pnas.2304596120. Epub 2023 Apr 24. Proc Natl Acad Sci U S A. 2023. PMID: 37094154 Free PMC article. No abstract available.

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