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Accurate prediction by AlphaFold2 for ligand binding in a reductive dehalogenase and implications for PFAS (per- and polyfluoroalkyl substance) biodegradation.
Guo HB, Varaljay VA, Kedziora G, Taylor K, Farajollahi S, Lombardo N, Harper E, Hung C, Gross M, Perminov A, Dennis P, Kelley-Loughnane N, Berry R. Guo HB, et al. Among authors: berry r. Sci Rep. 2023 Mar 11;13(1):4082. doi: 10.1038/s41598-023-30310-x. Sci Rep. 2023. PMID: 36906658 Free PMC article.
Defluorination of Organofluorine Compounds Using Dehalogenase Enzymes from Delftia acidovorans (D4B).
Farajollahi S, Lombardo NV, Crenshaw MD, Guo HB, Doherty ME, Davison TR, Steel JJ, Almand EA, Varaljay VA, Suei-Hung C, Mirau PA, Berry RJ, Kelley-Loughnane N, Dennis PB. Farajollahi S, et al. Among authors: berry rj. ACS Omega. 2024 Jun 24;9(26):28546-28555. doi: 10.1021/acsomega.4c02517. eCollection 2024 Jul 2. ACS Omega. 2024. PMID: 38973860 Free PMC article.
Computation of the binding free energy of peptides to graphene in explicit water.
Welch CM, Camden AN, Barr SA, Leuty GM, Kedziora GS, Berry RJ. Welch CM, et al. J Chem Phys. 2015 Jul 28;143(4):045104. doi: 10.1063/1.4927344. J Chem Phys. 2015. PMID: 26233167
In this study, the binding of glycine (G) capped amino acid residues (termed GXG tripeptides) to trilayer graphene surfaces in aqueous solution was examined and compared to results previously obtained for peptide binding to single-layer free-standing graphene [A. N. Camden, S. A. …
In this study, the binding of glycine (G) capped amino acid residues (termed GXG tripeptides) to trilayer graphene surfaces in aqueous solut …
1,499 results