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Page 1
Selection of data sets for FAIRification in drug discovery and development: Which, why, and how?
Alharbi E, Gadiya Y, Henderson D, Zaliani A, Delfin-Rossaro A, Cambon-Thomsen A, Kohler M, Witt G, Welter D, Juty N, Jay C, Engkvist O, Goble C, Reilly DS, Satagopam V, Ioannidis V, Gu W, Gribbon P. Alharbi E, et al. Among authors: satagopam v. Drug Discov Today. 2022 Aug;27(8):2080-2085. doi: 10.1016/j.drudis.2022.05.010. Epub 2022 May 17. Drug Discov Today. 2022. PMID: 35595012 Free PMC article. Review.
Visualization of automatically combined disease maps and pathway diagrams for rare diseases.
Gawron P, Hoksza D, Piñero J, Peña-Chilet M, Esteban-Medina M, Fernandez-Rueda JL, Colonna V, Smula E, Heirendt L, Ancien F, Groues V, Satagopam VP, Schneider R, Dopazo J, Furlong LI, Ostaszewski M. Gawron P, et al. Among authors: satagopam vp. Front Bioinform. 2023 Jul 12;3:1101505. doi: 10.3389/fbinf.2023.1101505. eCollection 2023. Front Bioinform. 2023. PMID: 37502697 Free PMC article.
Development of a long noncoding RNA-based machine learning model to predict COVID-19 in-hospital mortality.
Devaux Y, Zhang L, Lumley AI, Karaduzovic-Hadziabdic K, Mooser V, Rousseau S, Shoaib M, Satagopam V, Adilovic M, Srivastava PK, Emanueli C, Martelli F, Greco S, Badimon L, Padro T, Lustrek M, Scholz M, Rosolowski M, Jordan M, Brandenburger T, Benczik B, Agg B, Ferdinandy P, Vehreschild JJ, Lorenz-Depiereux B, Dörr M, Witzke O, Sanchez G, Kul S, Baker AH, Fagherazzi G, Ollert M, Wereski R, Mills NL, Firat H. Devaux Y, et al. Among authors: satagopam v. Nat Commun. 2024 May 20;15(1):4259. doi: 10.1038/s41467-024-47557-1. Nat Commun. 2024. PMID: 38769334 Free PMC article.
Grand challenges in bioinformatics education and training.
Işık EB, Brazas MD, Schwartz R, Gaeta B, Palagi PM, van Gelder CWG, Suravajhala P, Singh H, Morgan SL, Zahroh H, Ling M, Satagopam VP, McGrath A, Nakai K, Tan TW, Gao G, Mulder N, Schönbach C, Zheng Y, De Las Rivas J, Khan AM. Işık EB, et al. Nat Biotechnol. 2023 Aug;41(8):1171-1174. doi: 10.1038/s41587-023-01891-9. Nat Biotechnol. 2023. PMID: 37568018 No abstract available.
Data and knowledge management in translational research: implementation of the eTRIKS platform for the IMI OncoTrack consortium.
Gu W, Yildirimman R, Van der Stuyft E, Verbeeck D, Herzinger S, Satagopam V, Barbosa-Silva A, Schneider R, Lange B, Lehrach H, Guo Y, Henderson D, Rowe A; IMI OncoTrack and the IMI eTRIKS consortia. Gu W, et al. Among authors: satagopam v. BMC Bioinformatics. 2019 Apr 1;20(1):164. doi: 10.1186/s12859-019-2748-y. BMC Bioinformatics. 2019. PMID: 30935364 Free PMC article.
Road to effective data curation for translational research.
Gu W, Hasan S, Rocca-Serra P, Satagopam VP. Gu W, et al. Drug Discov Today. 2021 Mar;26(3):626-630. doi: 10.1016/j.drudis.2020.12.007. Epub 2020 Dec 15. Drug Discov Today. 2021. PMID: 33338655 Free article. Review.
93 results