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The Quest for Orthologs orthology benchmark service in 2022.
Nevers Y, Jones TEM, Jyothi D, Yates B, Ferret M, Portell-Silva L, Codo L, Cosentino S, Marcet-Houben M, Vlasova A, Poidevin L, Kress A, Hickman M, Persson E, Piližota I, Guijarro-Clarke C; OpenEBench team the Quest for Orthologs Consortium; Iwasaki W, Lecompte O, Sonnhammer E, Roos DS, Gabaldón T, Thybert D, Thomas PD, Hu Y, Emms DM, Bruford E, Capella-Gutierrez S, Martin MJ, Dessimoz C, Altenhoff A. Nevers Y, et al. Among authors: hu y. Nucleic Acids Res. 2022 Jul 5;50(W1):W623-W632. doi: 10.1093/nar/gkac330. Nucleic Acids Res. 2022. PMID: 35552456 Free PMC article.
Quest for Orthologs in the Era of Biodiversity Genomics.
Langschied F, Bordin N, Cosentino S, Fuentes-Palacios D, Glover N, Hiller M, Hu Y, Huerta-Cepas J, Coelho LP, Iwasaki W, Majidian S, Manzano-Morales S, Persson E, Richards TA, Gabaldón T, Sonnhammer E, Thomas PD, Dessimoz C, Ebersberger I. Langschied F, et al. Among authors: hu y. Genome Biol Evol. 2024 Oct 9;16(10):evae224. doi: 10.1093/gbe/evae224. Genome Biol Evol. 2024. PMID: 39404012 Free PMC article. Review.
New developments for the Quest for Orthologs benchmark service.
Altenhoff A, Nevers Y, Tran V, Jyothi D, Martin M, Cosentino S, Majidian S, Marcet-Houben M, Fuentes-Palacios D, Persson E, Walsh T, Lecompte O, Gabaldón T, Kelly S, Hu Y, Iwasaki W, Capella-Gutierrez S, Dessimoz C, Thomas PD, Ebersberger I, Sonnhammer E. Altenhoff A, et al. Among authors: hu y. NAR Genom Bioinform. 2024 Dec 11;6(4):lqae167. doi: 10.1093/nargab/lqae167. eCollection 2024 Dec. NAR Genom Bioinform. 2024. PMID: 39664814 Free PMC article.
FlyRNAi.org--the database of the Drosophila RNAi screening center: 2012 update.
Flockhart IT, Booker M, Hu Y, McElvany B, Gilly Q, Mathey-Prevot B, Perrimon N, Mohr SE. Flockhart IT, et al. Among authors: hu y. Nucleic Acids Res. 2012 Jan;40(Database issue):D715-9. doi: 10.1093/nar/gkr953. Epub 2011 Nov 8. Nucleic Acids Res. 2012. PMID: 22067456 Free PMC article.
FlyBase at 25: looking to the future.
Gramates LS, Marygold SJ, Santos GD, Urbano JM, Antonazzo G, Matthews BB, Rey AJ, Tabone CJ, Crosby MA, Emmert DB, Falls K, Goodman JL, Hu Y, Ponting L, Schroeder AJ, Strelets VB, Thurmond J, Zhou P; the FlyBase Consortium. Gramates LS, et al. Among authors: hu y. Nucleic Acids Res. 2017 Jan 4;45(D1):D663-D671. doi: 10.1093/nar/gkw1016. Epub 2016 Oct 30. Nucleic Acids Res. 2017. PMID: 27799470 Free PMC article.
Expression Atlas update: insights from sequencing data at both bulk and single cell level.
George N, Fexova S, Fuentes AM, Madrigal P, Bi Y, Iqbal H, Kumbham U, Nolte NF, Zhao L, Thanki AS, Yu ID, Marugan Calles JC, Erdos K, Vilmovsky L, Kurri SR, Vathrakokoili-Pournara A, Osumi-Sutherland D, Prakash A, Wang S, Tello-Ruiz MK, Kumari S, Ware D, Goutte-Gattat D, Hu Y, Brown N, Perrimon N, Vizcaíno JA, Burdett T, Teichmann S, Brazma A, Papatheodorou I. George N, et al. Among authors: hu y. Nucleic Acids Res. 2024 Jan 5;52(D1):D107-D114. doi: 10.1093/nar/gkad1021. Nucleic Acids Res. 2024. PMID: 37992296 Free PMC article.
48,063 results
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